Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 MIR589-201ENST00000385238 99 ntBASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 RN7SKP59-201ENST00000410520 314 ntBASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 SETP15-201ENST00000412724 337 ntBASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 AL161722.2-201ENST00000434731 981 ntBASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 RN7SL189P-201ENST00000468631 289 ntBASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 SIAH1P1-201ENST00000479411 923 ntBASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 RN7SL814P-201ENST00000487715 300 ntBASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 AC006427.1-201ENST00000514359 712 ntBASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 EIF3KP3-201ENST00000514461 639 ntBASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 BX510359.5-201ENST00000515651 304 ntBASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 AC012146.2-201ENST00000576545 416 ntBASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 MTCYBP13-201ENST00000578634 1093 ntBASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 RN7SL708P-201ENST00000580952 299 ntBASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 AC091932.2-201ENST00000623014 291 ntBASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 MTCO1P1-201ENST00000624263 1081 ntBASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.85□□□□□ -1.47
CCDC65Q8IXS2 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 RNU1-146P-201ENST00000364015 165 ntBASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 RNA5SP435-201ENST00000364044 108 ntBASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 OR8V1P-201ENST00000395193 873 ntBASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 AL512422.1-201ENST00000407033 553 ntBASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 CHEK2P5-201ENST00000423877 246 ntBASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 NPM1P22-201ENST00000427761 952 ntBASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 GAPDHP58-201ENST00000438477 1006 ntBASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 RPL5P25-201ENST00000441148 775 ntBASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 RPS26P41-201ENST00000450370 284 ntBASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 AC138409.2-202ENST00000507274 458 ntBASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 AC027369.5-201ENST00000533838 755 ntBASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 AC106730.2-201ENST00000566641 540 ntBASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 AC011445.2-201ENST00000599274 173 ntBASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 MIR6837-201ENST00000620884 64 ntBASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 AC136428.4-201ENST00000634254 1155 ntBASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC65Q8IXS2 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
CCDC65Q8IXS2 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CCDC65Q8IXS2 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CCDC65Q8IXS2 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 AC092747.4-201ENST00000620519 1861 ntBASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 RN7SKP160-201ENST00000363804 340 ntBASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 RNA5SP223-201ENST00000365174 120 ntBASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 SNORA67-201ENST00000384423 137 ntBASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 U3.25-201ENST00000391209 220 ntBASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 SETP10-201ENST00000424368 814 ntBASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 AC093655.2-201ENST00000425735 631 ntBASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 RPL7L1P9-201ENST00000431298 745 ntBASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 RPL7P6-201ENST00000480903 738 ntBASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 AL049874.2-201ENST00000492636 288 ntBASIC5.83□□□□□ -1.48
CCDC65Q8IXS2 RN7SL101P-201ENST00000496350 279 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms