Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 RPL21P129-201ENST00000491732 478 ntBASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 SCARNA22-201ENST00000503991 125 ntBASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 HMGB1P23-201ENST00000518743 568 ntBASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 FCF1-203ENST00000553615 954 ntTSL 3 BASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 AP005119.2-201ENST00000579735 1105 ntBASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 AC023575.1-201ENST00000580510 358 ntBASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 AC015712.7-201ENST00000615211 635 ntBASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 DLEU1_1.1-201ENST00000618107 190 ntBASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 MIR6853-201ENST00000619642 74 ntBASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 AC124944.2-201ENST00000429866 1242 ntBASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 AC109327.1-201ENST00000471666 403 ntBASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 AC093827.1-201ENST00000480094 861 ntBASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 AP001804.1-201ENST00000526868 919 ntBASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 MIR6716-201ENST00000613413 80 ntBASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC8.32□□□□□ -1.08
SNAPC4Q5SXM2 AC099654.2-201ENST00000433031 1980 ntBASIC8.31□□□□□ -1.08
SNAPC4Q5SXM2 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SNAPC4Q5SXM2 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC8.31□□□□□ -1.08
SNAPC4Q5SXM2 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SNAPC4Q5SXM2 AC104118.1-201ENST00000607625 1589 ntBASIC8.31□□□□□ -1.08
SNAPC4Q5SXM2 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SNAPC4Q5SXM2 SNORA37-201ENST00000384504 129 ntBASIC8.31□□□□□ -1.08
SNAPC4Q5SXM2 MIR23B-201ENST00000384832 97 ntBASIC8.31□□□□□ -1.08
SNAPC4Q5SXM2 SNORA48.7-201ENST00000391302 135 ntBASIC8.31□□□□□ -1.08
SNAPC4Q5SXM2 RPL17P50-201ENST00000396131 546 ntBASIC8.31□□□□□ -1.08
SNAPC4Q5SXM2 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC8.31□□□□□ -1.08
SNAPC4Q5SXM2 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC8.31□□□□□ -1.08
SNAPC4Q5SXM2 SLC25A18P1-201ENST00000449385 454 ntBASIC8.31□□□□□ -1.08
SNAPC4Q5SXM2 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SNAPC4Q5SXM2 CYCSP29-201ENST00000533731 318 ntBASIC8.31□□□□□ -1.08
SNAPC4Q5SXM2 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC8.31□□□□□ -1.08
SNAPC4Q5SXM2 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC8.31□□□□□ -1.08
SNAPC4Q5SXM2 AC015799.1-201ENST00000622996 3122 ntBASIC8.31□□□□□ -1.08
SNAPC4Q5SXM2 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC8.31□□□□□ -1.08
SNAPC4Q5SXM2 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
SNAPC4Q5SXM2 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SNAPC4Q5SXM2 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
SNAPC4Q5SXM2 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
SNAPC4Q5SXM2 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
SNAPC4Q5SXM2 RPL31-204ENST00000409038 817 ntTSL 2 BASIC8.3□□□□□ -1.08
SNAPC4Q5SXM2 AL389915.1-201ENST00000422463 466 ntBASIC8.3□□□□□ -1.08
SNAPC4Q5SXM2 OR2B7P-201ENST00000429302 934 ntBASIC8.3□□□□□ -1.08
SNAPC4Q5SXM2 AC023141.6-201ENST00000429418 337 ntBASIC8.3□□□□□ -1.08
SNAPC4Q5SXM2 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC8.3□□□□□ -1.08
SNAPC4Q5SXM2 TDGF1P1-201ENST00000445734 527 ntBASIC8.3□□□□□ -1.08
SNAPC4Q5SXM2 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC8.3□□□□□ -1.08
SNAPC4Q5SXM2 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC8.3□□□□□ -1.08
SNAPC4Q5SXM2 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC8.3□□□□□ -1.08
SNAPC4Q5SXM2 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC8.3□□□□□ -1.08
SNAPC4Q5SXM2 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC8.3□□□□□ -1.08
SNAPC4Q5SXM2 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SNAPC4Q5SXM2 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SNAPC4Q5SXM2 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
SNAPC4Q5SXM2 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC8.3□□□□□ -1.08
SNAPC4Q5SXM2 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC8.29□□□□□ -1.08
SNAPC4Q5SXM2 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
SNAPC4Q5SXM2 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
SNAPC4Q5SXM2 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SNAPC4Q5SXM2 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
SNAPC4Q5SXM2 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SNAPC4Q5SXM2 RNA5SP28-201ENST00000363841 119 ntBASIC8.29□□□□□ -1.08
SNAPC4Q5SXM2 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC8.29□□□□□ -1.08
SNAPC4Q5SXM2 FABP7P1-201ENST00000424004 391 ntBASIC8.29□□□□□ -1.08
SNAPC4Q5SXM2 RPEP3-201ENST00000425462 676 ntBASIC8.29□□□□□ -1.08
SNAPC4Q5SXM2 RPL7P41-201ENST00000485823 957 ntBASIC8.29□□□□□ -1.08
SNAPC4Q5SXM2 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC8.29□□□□□ -1.08
SNAPC4Q5SXM2 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SNAPC4Q5SXM2 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC8.29□□□□□ -1.08
SNAPC4Q5SXM2 ENPP7P9-201ENST00000514456 627 ntBASIC8.29□□□□□ -1.08
SNAPC4Q5SXM2 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
SNAPC4Q5SXM2 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
SNAPC4Q5SXM2 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
SNAPC4Q5SXM2 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC8.29□□□□□ -1.08
SNAPC4Q5SXM2 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
SNAPC4Q5SXM2 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SNAPC4Q5SXM2 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
SNAPC4Q5SXM2 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC8.29□□□□□ -1.08
SNAPC4Q5SXM2 AC009951.1-201ENST00000623674 2614 ntBASIC8.28□□□□□ -1.08
SNAPC4Q5SXM2 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC8.28□□□□□ -1.08
SNAPC4Q5SXM2 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms