Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC090241.1-201ENST00000587732 621 ntBASIC8.42□□□□□ -1.06
VARS2Q5ST30 TPMTP1-201ENST00000592307 737 ntBASIC8.42□□□□□ -1.06
VARS2Q5ST30 AP003068.4-201ENST00000623192 802 ntBASIC8.42□□□□□ -1.06
VARS2Q5ST30 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC8.42□□□□□ -1.06
VARS2Q5ST30 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC8.42□□□□□ -1.06
VARS2Q5ST30 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC8.42□□□□□ -1.06
VARS2Q5ST30 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC8.42□□□□□ -1.06
VARS2Q5ST30 LINC02128-205ENST00000641755 1334 ntBASIC8.42□□□□□ -1.06
VARS2Q5ST30 AC097714.1-201ENST00000511272 1647 ntBASIC8.42□□□□□ -1.06
VARS2Q5ST30 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
VARS2Q5ST30 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
VARS2Q5ST30 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
VARS2Q5ST30 AL731566.1-201ENST00000620490 1937 ntBASIC8.42□□□□□ -1.06
VARS2Q5ST30 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC8.42□□□□□ -1.06
VARS2Q5ST30 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
VARS2Q5ST30 SELP-202ENST00000367786 2402 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
VARS2Q5ST30 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
VARS2Q5ST30 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
VARS2Q5ST30 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
VARS2Q5ST30 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
VARS2Q5ST30 FMOD-201ENST00000354955 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
VARS2Q5ST30 FMN2-206ENST00000543681 2902 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VARS2Q5ST30 SLAMF7-211ENST00000621377 2608 ntTSL 2 BASIC8.41□□□□□ -1.06
VARS2Q5ST30 ABLIM1-205ENST00000369266 2230 ntTSL 5 BASIC8.41□□□□□ -1.06
VARS2Q5ST30 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
VARS2Q5ST30 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VARS2Q5ST30 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
VARS2Q5ST30 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
VARS2Q5ST30 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
VARS2Q5ST30 EEF1A1P3-201ENST00000417549 1385 ntBASIC8.41□□□□□ -1.06
VARS2Q5ST30 NOLC1-209ENST00000605788 3932 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
VARS2Q5ST30 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
VARS2Q5ST30 RPL10P16-201ENST00000325000 645 ntBASIC8.41□□□□□ -1.06
VARS2Q5ST30 OR11H13P-201ENST00000359695 979 ntBASIC8.41□□□□□ -1.06
VARS2Q5ST30 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
VARS2Q5ST30 AC127391.1-201ENST00000411737 98 ntBASIC8.41□□□□□ -1.06
VARS2Q5ST30 AP000275.1-201ENST00000411943 390 ntBASIC8.41□□□□□ -1.06
VARS2Q5ST30 RPL12P27-201ENST00000414870 496 ntBASIC8.41□□□□□ -1.06
VARS2Q5ST30 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC8.41□□□□□ -1.06
VARS2Q5ST30 ERLEC1P1-201ENST00000433806 578 ntBASIC8.41□□□□□ -1.06
VARS2Q5ST30 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC8.41□□□□□ -1.06
VARS2Q5ST30 LSM3P3-201ENST00000436601 306 ntBASIC8.41□□□□□ -1.06
VARS2Q5ST30 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC8.41□□□□□ -1.06
VARS2Q5ST30 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC8.41□□□□□ -1.06
VARS2Q5ST30 OR1H1P-201ENST00000448731 937 ntBASIC8.41□□□□□ -1.06
VARS2Q5ST30 GCNT1P5-201ENST00000449274 682 ntBASIC8.41□□□□□ -1.06
VARS2Q5ST30 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC8.41□□□□□ -1.06
VARS2Q5ST30 AC010307.1-201ENST00000467206 836 ntBASIC8.41□□□□□ -1.06
VARS2Q5ST30 PFN1P6-201ENST00000476786 399 ntBASIC8.41□□□□□ -1.06
VARS2Q5ST30 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC8.41□□□□□ -1.06
VARS2Q5ST30 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
VARS2Q5ST30 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VARS2Q5ST30 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC8.41□□□□□ -1.06
VARS2Q5ST30 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VARS2Q5ST30 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VARS2Q5ST30 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC8.41□□□□□ -1.06
VARS2Q5ST30 OR8R1P-201ENST00000543943 764 ntBASIC8.41□□□□□ -1.06
VARS2Q5ST30 AC079384.1-201ENST00000548506 600 ntTSL 4 BASIC8.41□□□□□ -1.06
VARS2Q5ST30 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC8.41□□□□□ -1.06
VARS2Q5ST30 HMGB1P6-201ENST00000569046 646 ntBASIC8.41□□□□□ -1.06
VARS2Q5ST30 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC8.41□□□□□ -1.06
VARS2Q5ST30 STX8-209ENST00000574431 731 ntTSL 3 BASIC8.41□□□□□ -1.06
VARS2Q5ST30 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC8.41□□□□□ -1.06
VARS2Q5ST30 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VARS2Q5ST30 AL158151.4-201ENST00000600965 507 ntBASIC8.41□□□□□ -1.06
VARS2Q5ST30 AC004908.1-201ENST00000606572 541 ntBASIC8.41□□□□□ -1.06
VARS2Q5ST30 AL133173.2-201ENST00000614270 90 ntBASIC8.41□□□□□ -1.06
VARS2Q5ST30 AL354950.2-201ENST00000617939 290 ntBASIC8.41□□□□□ -1.06
VARS2Q5ST30 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC8.41□□□□□ -1.06
VARS2Q5ST30 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
VARS2Q5ST30 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VARS2Q5ST30 ZNF781-201ENST00000358582 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
VARS2Q5ST30 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
VARS2Q5ST30 KCNJ15-205ENST00000398930 2914 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
VARS2Q5ST30 GDNF-AS1-203ENST00000514532 2913 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VARS2Q5ST30 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VARS2Q5ST30 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
VARS2Q5ST30 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
VARS2Q5ST30 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
VARS2Q5ST30 MET-204ENST00000436117 2295 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VARS2Q5ST30 SETD7-207ENST00000608958 5281 ntTSL 5 BASIC8.41□□□□□ -1.06
VARS2Q5ST30 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VARS2Q5ST30 AC008985.1-201ENST00000624169 2239 ntBASIC8.41□□□□□ -1.06
VARS2Q5ST30 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
VARS2Q5ST30 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
VARS2Q5ST30 TMCC1-AS1-204ENST00000605830 3496 ntTSL 2 BASIC8.41□□□□□ -1.06
VARS2Q5ST30 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC8.41□□□□□ -1.06
VARS2Q5ST30 AFP-201ENST00000226359 1914 ntTSL 5 BASIC8.41□□□□□ -1.06
VARS2Q5ST30 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC8.41□□□□□ -1.06
VARS2Q5ST30 AC006020.1-201ENST00000420179 1854 ntBASIC8.4□□□□□ -1.06
VARS2Q5ST30 DNAH9-215ENST00000608377 3147 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
VARS2Q5ST30 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC8.4□□□□□ -1.06
VARS2Q5ST30 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
VARS2Q5ST30 ADA2-204ENST00000399839 3986 ntAPPRIS P3 TSL 5 BASIC8.4□□□□□ -1.06
VARS2Q5ST30 SND1-IT1-201ENST00000623342 2481 ntBASIC8.4□□□□□ -1.06
VARS2Q5ST30 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC8.4□□□□□ -1.06
VARS2Q5ST30 APEX2-201ENST00000374987 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
VARS2Q5ST30 BTN2A1-203ENST00000429381 3113 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
VARS2Q5ST30 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC8.4□□□□□ -1.06
VARS2Q5ST30 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms