Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 TMSB4XP2-201ENST00000335179 210 ntBASIC4.71□□□□□ -1.66
CCDC58Q4VC31 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 MIR375-201ENST00000362103 64 ntBASIC4.71□□□□□ -1.66
CCDC58Q4VC31 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 MIR137-201ENST00000385223 102 ntBASIC4.71□□□□□ -1.66
CCDC58Q4VC31 ATP5F1P2-201ENST00000398143 760 ntBASIC4.71□□□□□ -1.66
CCDC58Q4VC31 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 AC005297.1-201ENST00000444765 862 ntBASIC4.71□□□□□ -1.66
CCDC58Q4VC31 AL031584.1-201ENST00000447169 754 ntBASIC4.71□□□□□ -1.66
CCDC58Q4VC31 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 AP000547.1-201ENST00000454360 617 ntBASIC4.71□□□□□ -1.66
CCDC58Q4VC31 AC025458.1-201ENST00000506046 166 ntBASIC4.71□□□□□ -1.66
CCDC58Q4VC31 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 OR5H7P-201ENST00000514084 930 ntBASIC4.71□□□□□ -1.66
CCDC58Q4VC31 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 MIR6737-201ENST00000617385 70 ntBASIC4.71□□□□□ -1.66
CCDC58Q4VC31 BX005214.3-202ENST00000619809 325 ntBASIC4.71□□□□□ -1.66
CCDC58Q4VC31 AL023881.1-201ENST00000621088 301 ntBASIC4.71□□□□□ -1.66
CCDC58Q4VC31 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 AC006210.2-201ENST00000367074 1545 ntBASIC4.71□□□□□ -1.66
CCDC58Q4VC31 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 TLK1P1-201ENST00000456760 2440 ntBASIC4.71□□□□□ -1.66
CCDC58Q4VC31 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC58Q4VC31 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC58Q4VC31 DDX18P3-201ENST00000404856 2007 ntBASIC4.7□□□□□ -1.66
CCDC58Q4VC31 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CCDC58Q4VC31 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CCDC58Q4VC31 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC58Q4VC31 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
CCDC58Q4VC31 OR10J6P-201ENST00000289731 930 ntBASIC4.7□□□□□ -1.66
CCDC58Q4VC31 RNU1-65P-201ENST00000363919 148 ntBASIC4.7□□□□□ -1.66
CCDC58Q4VC31 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC58Q4VC31 SUGT1P2-201ENST00000379452 992 ntBASIC4.7□□□□□ -1.66
CCDC58Q4VC31 AC127526.2-201ENST00000426436 775 ntBASIC4.7□□□□□ -1.66
CCDC58Q4VC31 BX323845.3-201ENST00000428215 527 ntBASIC4.7□□□□□ -1.66
CCDC58Q4VC31 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC58Q4VC31 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC58Q4VC31 TIMM8BP2-201ENST00000445940 251 ntBASIC4.7□□□□□ -1.66
CCDC58Q4VC31 PTMAP3-201ENST00000447474 330 ntBASIC4.7□□□□□ -1.66
CCDC58Q4VC31 AL035090.1-201ENST00000454835 332 ntBASIC4.7□□□□□ -1.66
CCDC58Q4VC31 ACA64.1-201ENST00000459171 127 ntBASIC4.7□□□□□ -1.66
CCDC58Q4VC31 RPL7AP28-201ENST00000464513 571 ntBASIC4.7□□□□□ -1.66
CCDC58Q4VC31 RPL7P41-201ENST00000485823 957 ntBASIC4.7□□□□□ -1.66
CCDC58Q4VC31 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC58Q4VC31 HMGB1P44-201ENST00000508597 572 ntBASIC4.7□□□□□ -1.66
CCDC58Q4VC31 MRPS5P3-201ENST00000515577 166 ntBASIC4.7□□□□□ -1.66
CCDC58Q4VC31 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC58Q4VC31 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC58Q4VC31 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.7□□□□□ -1.66
CCDC58Q4VC31 MRPS21P7-201ENST00000566937 238 ntBASIC4.7□□□□□ -1.66
CCDC58Q4VC31 MIR3154-201ENST00000577829 84 ntBASIC4.7□□□□□ -1.66
CCDC58Q4VC31 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.7□□□□□ -1.66
CCDC58Q4VC31 AC012616.1-201ENST00000600294 197 ntBASIC4.7□□□□□ -1.66
CCDC58Q4VC31 AC009597.2-201ENST00000604659 592 ntBASIC4.7□□□□□ -1.66
CCDC58Q4VC31 AC018695.5-201ENST00000605872 315 ntBASIC4.7□□□□□ -1.66
CCDC58Q4VC31 AC244517.3-201ENST00000616254 1235 ntBASIC4.7□□□□□ -1.66
CCDC58Q4VC31 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC58Q4VC31 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC58Q4VC31 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.7□□□□□ -1.66
CCDC58Q4VC31 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC58Q4VC31 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC58Q4VC31 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC58Q4VC31 SRRM1P3-201ENST00000426911 2678 ntBASIC4.69□□□□□ -1.66
CCDC58Q4VC31 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC58Q4VC31 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC58Q4VC31 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CCDC58Q4VC31 NEPNP-201ENST00000404786 1371 ntBASIC4.69□□□□□ -1.66
CCDC58Q4VC31 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC58Q4VC31 AL450345.1-202ENST00000605741 3881 ntBASIC4.69□□□□□ -1.66
CCDC58Q4VC31 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CCDC58Q4VC31 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
CCDC58Q4VC31 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC58Q4VC31 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC58Q4VC31 MIR589-201ENST00000385238 99 ntBASIC4.69□□□□□ -1.66
CCDC58Q4VC31 AL512430.2-201ENST00000406786 339 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms