Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 U3.28-201ENST00000391249 210 ntBASIC5.41□□□□□ -1.54
HTTP42858 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.41□□□□□ -1.54
HTTP42858 SNORA59A-201ENST00000459326 152 ntBASIC5.41□□□□□ -1.54
HTTP42858 RPL21P126-201ENST00000470049 478 ntBASIC5.41□□□□□ -1.54
HTTP42858 SCARNA13-201ENST00000516672 275 ntBASIC5.41□□□□□ -1.54
HTTP42858 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.41□□□□□ -1.54
HTTP42858 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.41□□□□□ -1.54
HTTP42858 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HTTP42858 RN7SL176P-201ENST00000580352 264 ntBASIC5.41□□□□□ -1.54
HTTP42858 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HTTP42858 AC004777.1-201ENST00000624317 287 ntBASIC5.41□□□□□ -1.54
HTTP42858 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
HTTP42858 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
HTTP42858 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.41□□□□□ -1.54
HTTP42858 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HTTP42858 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HTTP42858 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HTTP42858 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
HTTP42858 TLK1P1-201ENST00000456760 2440 ntBASIC5.41□□□□□ -1.54
HTTP42858 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.41□□□□□ -1.54
HTTP42858 AC073358.1-201ENST00000505671 684 ntBASIC5.41□□□□□ -1.54
HTTP42858 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.41□□□□□ -1.54
HTTP42858 AC034229.2-201ENST00000566945 2508 ntBASIC5.41□□□□□ -1.54
HTTP42858 AC017100.2-201ENST00000584628 355 ntBASIC5.41□□□□□ -1.54
HTTP42858 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.41□□□□□ -1.54
HTTP42858 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
HTTP42858 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HTTP42858 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HTTP42858 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HTTP42858 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HTTP42858 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC5.41□□□□□ -1.54
HTTP42858 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
HTTP42858 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
HTTP42858 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HTTP42858 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HTTP42858 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HTTP42858 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HTTP42858 ARL4AP5-201ENST00000404372 599 ntBASIC5.41□□□□□ -1.54
HTTP42858 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.41□□□□□ -1.54
HTTP42858 OR8G2P-201ENST00000412796 908 ntBASIC5.41□□□□□ -1.54
HTTP42858 RPS26P38-201ENST00000414476 348 ntBASIC5.41□□□□□ -1.54
HTTP42858 PRPF38AP1-201ENST00000451976 933 ntBASIC5.41□□□□□ -1.54
HTTP42858 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.41□□□□□ -1.54
HTTP42858 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.41□□□□□ -1.54
HTTP42858 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HTTP42858 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.41□□□□□ -1.54
HTTP42858 HIVEP3-201ENST00000372583 12193 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
HTTP42858 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HTTP42858 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.41□□□□□ -1.54
HTTP42858 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
HTTP42858 TNFAIP8-206ENST00000504771 8681 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HTTP42858 BIVM-ERCC5-201ENST00000602836 5143 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.54
HTTP42858 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC5.4□□□□□ -1.54
HTTP42858 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HTTP42858 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
HTTP42858 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HTTP42858 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HTTP42858 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.4□□□□□ -1.54
HTTP42858 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HTTP42858 AL139039.2-201ENST00000407436 479 ntBASIC5.4□□□□□ -1.54
HTTP42858 FABP5P2-201ENST00000439042 408 ntBASIC5.4□□□□□ -1.54
HTTP42858 AL353748.1-201ENST00000440753 474 ntBASIC5.4□□□□□ -1.54
HTTP42858 YWHABP1-201ENST00000445359 727 ntBASIC5.4□□□□□ -1.54
HTTP42858 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.4□□□□□ -1.54
HTTP42858 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.4□□□□□ -1.54
HTTP42858 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.4□□□□□ -1.54
HTTP42858 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HTTP42858 APBB2-201ENST00000295974 8972 ntAPPRIS ALT1 TSL 2 BASIC5.4□□□□□ -1.54
HTTP42858 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HTTP42858 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HTTP42858 SOCS5P3-201ENST00000425115 1576 ntBASIC5.4□□□□□ -1.54
HTTP42858 MEF2C-209ENST00000504921 7561 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HTTP42858 NSD2-212ENST00000503128 8568 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HTTP42858 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
HTTP42858 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HTTP42858 ZNF217-201ENST00000302342 5633 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HTTP42858 AL355916.1-202ENST00000508827 5103 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HTTP42858 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.4□□□□□ -1.55
HTTP42858 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.4□□□□□ -1.55
HTTP42858 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.4□□□□□ -1.55
HTTP42858 AC022726.1-201ENST00000587475 207 ntBASIC5.4□□□□□ -1.55
HTTP42858 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.4□□□□□ -1.55
HTTP42858 AC012409.3-201ENST00000611343 981 ntBASIC5.4□□□□□ -1.55
HTTP42858 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.4□□□□□ -1.55
HTTP42858 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HTTP42858 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.4□□□□□ -1.55
HTTP42858 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
HTTP42858 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HTTP42858 SLIT3-202ENST00000404867 8903 ntTSL 5 BASIC5.4□□□□□ -1.55
HTTP42858 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.39□□□□□ -1.55
HTTP42858 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HTTP42858 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HTTP42858 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HTTP42858 SNORA9-201ENST00000384215 133 ntBASIC5.39□□□□□ -1.55
HTTP42858 LRRC37BP1-201ENST00000398851 714 ntBASIC5.39□□□□□ -1.55
HTTP42858 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.39□□□□□ -1.55
HTTP42858 RN7SL443P-201ENST00000464331 290 ntBASIC5.39□□□□□ -1.55
HTTP42858 AC005412.2-201ENST00000492004 341 ntBASIC5.39□□□□□ -1.55
HTTP42858 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.39□□□□□ -1.55
HTTP42858 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms