Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CNGA1P29973 PDZK1P1-202ENST00000425209 1350 ntBASIC6.82□□□□□ -1.32
CNGA1P29973 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
CNGA1P29973 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CNGA1P29973 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CNGA1P29973 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
CNGA1P29973 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CNGA1P29973 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
CNGA1P29973 CCNT2P1-201ENST00000423082 1315 ntBASIC6.81□□□□□ -1.32
CNGA1P29973 AC117409.1-201ENST00000470499 1310 ntBASIC6.81□□□□□ -1.32
CNGA1P29973 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.81□□□□□ -1.32
CNGA1P29973 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
CNGA1P29973 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.81□□□□□ -1.32
CNGA1P29973 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
CNGA1P29973 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.81□□□□□ -1.32
CNGA1P29973 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CNGA1P29973 RNU1-19P-201ENST00000363306 165 ntBASIC6.81□□□□□ -1.32
CNGA1P29973 RN7SKP162-201ENST00000363605 345 ntBASIC6.81□□□□□ -1.32
CNGA1P29973 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CNGA1P29973 HMGB1P20-201ENST00000402555 677 ntBASIC6.81□□□□□ -1.32
CNGA1P29973 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.81□□□□□ -1.32
CNGA1P29973 NPM1P4-201ENST00000414095 812 ntBASIC6.81□□□□□ -1.32
CNGA1P29973 AC023128.2-201ENST00000420880 1223 ntBASIC6.81□□□□□ -1.32
CNGA1P29973 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.81□□□□□ -1.32
CNGA1P29973 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CNGA1P29973 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC6.81□□□□□ -1.32
CNGA1P29973 AC073909.1-201ENST00000447112 999 ntBASIC6.81□□□□□ -1.32
CNGA1P29973 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.81□□□□□ -1.32
CNGA1P29973 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.81□□□□□ -1.32
CNGA1P29973 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.81□□□□□ -1.32
CNGA1P29973 RPS3AP53-201ENST00000454716 778 ntBASIC6.81□□□□□ -1.32
CNGA1P29973 AC103563.5-201ENST00000455643 364 ntBASIC6.81□□□□□ -1.32
CNGA1P29973 RN7SL799P-201ENST00000475891 298 ntBASIC6.81□□□□□ -1.32
CNGA1P29973 RN7SL165P-201ENST00000477476 291 ntBASIC6.81□□□□□ -1.32
CNGA1P29973 RPL32P9-201ENST00000487963 407 ntBASIC6.81□□□□□ -1.32
CNGA1P29973 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CNGA1P29973 OR5M14P-201ENST00000506803 618 ntBASIC6.81□□□□□ -1.32
CNGA1P29973 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.81□□□□□ -1.32
CNGA1P29973 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.81□□□□□ -1.32
CNGA1P29973 MIR4509-3-201ENST00000578671 94 ntBASIC6.81□□□□□ -1.32
CNGA1P29973 MIR4509-2-201ENST00000583920 94 ntBASIC6.81□□□□□ -1.32
CNGA1P29973 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CNGA1P29973 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC6.81□□□□□ -1.32
CNGA1P29973 AL022067.1-201ENST00000602426 454 ntBASIC6.81□□□□□ -1.32
CNGA1P29973 AC011374.2-201ENST00000607135 526 ntBASIC6.81□□□□□ -1.32
CNGA1P29973 MIR4509-1-201ENST00000618224 94 ntBASIC6.81□□□□□ -1.32
CNGA1P29973 AP001153.1-201ENST00000641024 338 ntBASIC6.81□□□□□ -1.32
CNGA1P29973 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
CNGA1P29973 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.81□□□□□ -1.32
CNGA1P29973 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CNGA1P29973 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.81□□□□□ -1.32
CNGA1P29973 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CNGA1P29973 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CNGA1P29973 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CNGA1P29973 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CNGA1P29973 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.81□□□□□ -1.32
CNGA1P29973 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.81□□□□□ -1.32
CNGA1P29973 Z95114.1-201ENST00000624264 14574 ntBASIC6.81□□□□□ -1.32
CNGA1P29973 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.81□□□□□ -1.32
CNGA1P29973 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.81□□□□□ -1.32
CNGA1P29973 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CNGA1P29973 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.8□□□□□ -1.32
CNGA1P29973 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CNGA1P29973 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CNGA1P29973 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CNGA1P29973 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.8□□□□□ -1.32
CNGA1P29973 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CNGA1P29973 U3.7-201ENST00000363668 216 ntBASIC6.8□□□□□ -1.32
CNGA1P29973 SNORA58B-201ENST00000364259 136 ntBASIC6.8□□□□□ -1.32
CNGA1P29973 RNU6-1320P-201ENST00000390838 107 ntBASIC6.8□□□□□ -1.32
CNGA1P29973 RNU6-1269P-201ENST00000391139 107 ntBASIC6.8□□□□□ -1.32
CNGA1P29973 LINC01347-201ENST00000417964 355 ntBASIC6.8□□□□□ -1.32
CNGA1P29973 SETP9-201ENST00000423837 832 ntBASIC6.8□□□□□ -1.32
CNGA1P29973 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.8□□□□□ -1.32
CNGA1P29973 TRAPPC13P1-201ENST00000435991 1062 ntBASIC6.8□□□□□ -1.32
CNGA1P29973 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC6.8□□□□□ -1.32
CNGA1P29973 ARAFP2-201ENST00000440565 559 ntBASIC6.8□□□□□ -1.32
CNGA1P29973 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC6.8□□□□□ -1.32
CNGA1P29973 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.8□□□□□ -1.32
CNGA1P29973 EEF1B2P6-201ENST00000445713 673 ntBASIC6.8□□□□□ -1.32
CNGA1P29973 RAB28P2-201ENST00000454299 641 ntBASIC6.8□□□□□ -1.32
CNGA1P29973 RNU6-599P-201ENST00000459383 107 ntBASIC6.8□□□□□ -1.32
CNGA1P29973 RNU6-1193P-201ENST00000459461 107 ntBASIC6.8□□□□□ -1.32
CNGA1P29973 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CNGA1P29973 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.8□□□□□ -1.32
CNGA1P29973 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC6.8□□□□□ -1.32
CNGA1P29973 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.8□□□□□ -1.32
CNGA1P29973 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.8□□□□□ -1.32
CNGA1P29973 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.8□□□□□ -1.32
CNGA1P29973 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.8□□□□□ -1.32
CNGA1P29973 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.8□□□□□ -1.32
CNGA1P29973 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6.8□□□□□ -1.32
CNGA1P29973 AL109741.3-201ENST00000561748 592 ntBASIC6.8□□□□□ -1.32
CNGA1P29973 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.8□□□□□ -1.32
CNGA1P29973 AC073429.2-201ENST00000569694 1444 ntBASIC6.8□□□□□ -1.32
CNGA1P29973 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC6.8□□□□□ -1.32
CNGA1P29973 MIR1269B-201ENST00000580405 75 ntBASIC6.8□□□□□ -1.32
CNGA1P29973 BNIP3P38-201ENST00000601117 544 ntBASIC6.8□□□□□ -1.32
CNGA1P29973 AL021368.3-201ENST00000607119 578 ntBASIC6.8□□□□□ -1.32
CNGA1P29973 AC093673.2-201ENST00000609674 331 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms