Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.74□□□□□ -1.65
CD40LGP29965 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.74□□□□□ -1.65
CD40LGP29965 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.74□□□□□ -1.65
CD40LGP29965 AL445466.1-201ENST00000448432 357 ntBASIC4.74□□□□□ -1.65
CD40LGP29965 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC4.74□□□□□ -1.65
CD40LGP29965 ACA64.1-201ENST00000459171 127 ntBASIC4.74□□□□□ -1.65
CD40LGP29965 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.74□□□□□ -1.65
CD40LGP29965 RN7SL570P-201ENST00000484405 292 ntBASIC4.74□□□□□ -1.65
CD40LGP29965 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.74□□□□□ -1.65
CD40LGP29965 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC4.74□□□□□ -1.65
CD40LGP29965 AC139365.2-201ENST00000517972 253 ntBASIC4.74□□□□□ -1.65
CD40LGP29965 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.74□□□□□ -1.65
CD40LGP29965 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CD40LGP29965 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.74□□□□□ -1.65
CD40LGP29965 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.74□□□□□ -1.65
CD40LGP29965 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.74□□□□□ -1.65
CD40LGP29965 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.74□□□□□ -1.65
CD40LGP29965 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.74□□□□□ -1.65
CD40LGP29965 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.74□□□□□ -1.65
CD40LGP29965 AC092266.1-201ENST00000610958 165 ntBASIC4.74□□□□□ -1.65
CD40LGP29965 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.74□□□□□ -1.65
CD40LGP29965 Z95327.2-201ENST00000414579 1873 ntBASIC4.74□□□□□ -1.65
CD40LGP29965 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.74□□□□□ -1.65
CD40LGP29965 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.74□□□□□ -1.65
CD40LGP29965 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.74□□□□□ -1.65
CD40LGP29965 HSPA8P17-201ENST00000427029 1382 ntBASIC4.74□□□□□ -1.65
CD40LGP29965 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.74□□□□□ -1.65
CD40LGP29965 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CD40LGP29965 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CD40LGP29965 MT-RNR2-201ENST00000387347 1559 ntBASIC4.74□□□□□ -1.65
CD40LGP29965 AC091305.2-201ENST00000624049 1576 ntBASIC4.74□□□□□ -1.65
CD40LGP29965 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CD40LGP29965 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
CD40LGP29965 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CD40LGP29965 QRSL1P1-201ENST00000400977 1540 ntBASIC4.73□□□□□ -1.65
CD40LGP29965 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
CD40LGP29965 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CD40LGP29965 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CD40LGP29965 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CD40LGP29965 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CD40LGP29965 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CD40LGP29965 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CD40LGP29965 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.73□□□□□ -1.65
CD40LGP29965 RN7SKP171-201ENST00000364417 303 ntBASIC4.73□□□□□ -1.65
CD40LGP29965 RN7SKP153-201ENST00000365026 316 ntBASIC4.73□□□□□ -1.65
CD40LGP29965 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CD40LGP29965 AC016739.1-201ENST00000405359 345 ntBASIC4.73□□□□□ -1.65
CD40LGP29965 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.73□□□□□ -1.65
CD40LGP29965 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC4.73□□□□□ -1.65
CD40LGP29965 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.73□□□□□ -1.65
CD40LGP29965 AC007161.1-204ENST00000423039 460 ntBASIC4.73□□□□□ -1.65
CD40LGP29965 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.73□□□□□ -1.65
CD40LGP29965 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.73□□□□□ -1.65
CD40LGP29965 ATP6V1E1P1-201ENST00000439215 681 ntBASIC4.73□□□□□ -1.65
CD40LGP29965 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.73□□□□□ -1.65
CD40LGP29965 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.73□□□□□ -1.65
CD40LGP29965 RN7SL741P-201ENST00000482473 289 ntBASIC4.73□□□□□ -1.65
CD40LGP29965 AC016687.1-201ENST00000482574 353 ntBASIC4.73□□□□□ -1.65
CD40LGP29965 AC073610.1-201ENST00000489971 396 ntBASIC4.73□□□□□ -1.65
CD40LGP29965 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.73□□□□□ -1.65
CD40LGP29965 AC073073.1-201ENST00000493920 463 ntBASIC4.73□□□□□ -1.65
CD40LGP29965 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.73□□□□□ -1.65
CD40LGP29965 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC4.73□□□□□ -1.65
CD40LGP29965 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.73□□□□□ -1.65
CD40LGP29965 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
CD40LGP29965 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.73□□□□□ -1.65
CD40LGP29965 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC4.73□□□□□ -1.65
CD40LGP29965 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.73□□□□□ -1.65
CD40LGP29965 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC4.73□□□□□ -1.65
CD40LGP29965 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.73□□□□□ -1.65
CD40LGP29965 AP001804.2-201ENST00000533932 910 ntBASIC4.73□□□□□ -1.65
CD40LGP29965 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC4.73□□□□□ -1.65
CD40LGP29965 AC007956.1-201ENST00000555623 542 ntBASIC4.73□□□□□ -1.65
CD40LGP29965 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC4.73□□□□□ -1.65
CD40LGP29965 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.73□□□□□ -1.65
CD40LGP29965 AC079315.1-201ENST00000602952 623 ntBASIC4.73□□□□□ -1.65
CD40LGP29965 AC233280.2-201ENST00000603917 1070 ntBASIC4.73□□□□□ -1.65
CD40LGP29965 AC124916.2-201ENST00000604416 224 ntBASIC4.73□□□□□ -1.65
CD40LGP29965 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC4.73□□□□□ -1.65
CD40LGP29965 AC091167.5-201ENST00000605689 894 ntBASIC4.73□□□□□ -1.65
CD40LGP29965 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.73□□□□□ -1.65
CD40LGP29965 AC004801.6-201ENST00000616571 978 ntBASIC4.73□□□□□ -1.65
CD40LGP29965 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CD40LGP29965 AC104118.1-201ENST00000607625 1589 ntBASIC4.73□□□□□ -1.65
CD40LGP29965 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CD40LGP29965 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CD40LGP29965 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.73□□□□□ -1.65
CD40LGP29965 AC000123.3-201ENST00000624029 4975 ntBASIC4.73□□□□□ -1.65
CD40LGP29965 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CD40LGP29965 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
CD40LGP29965 OR51C1P-202ENST00000641159 1444 ntBASIC4.72□□□□□ -1.65
CD40LGP29965 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CD40LGP29965 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CD40LGP29965 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CD40LGP29965 SALL4P2-201ENST00000423288 2910 ntBASIC4.72□□□□□ -1.65
CD40LGP29965 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CD40LGP29965 RNA5SP433-201ENST00000364491 114 ntBASIC4.72□□□□□ -1.65
CD40LGP29965 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.72□□□□□ -1.65
CD40LGP29965 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CD40LGP29965 MIR621-201ENST00000384919 96 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms