Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.31□□□□□ -1.56
XRCC1P18887 AL713998.2-201ENST00000604538 1198 ntBASIC5.31□□□□□ -1.56
XRCC1P18887 AC091932.2-201ENST00000623014 291 ntBASIC5.31□□□□□ -1.56
XRCC1P18887 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.31□□□□□ -1.56
XRCC1P18887 AC074101.1-201ENST00000637861 241 ntBASIC5.31□□□□□ -1.56
XRCC1P18887 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.31□□□□□ -1.56
XRCC1P18887 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
XRCC1P18887 PABPC1P6-201ENST00000445594 1829 ntBASIC5.31□□□□□ -1.56
XRCC1P18887 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.31□□□□□ -1.56
XRCC1P18887 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.31□□□□□ -1.56
XRCC1P18887 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
XRCC1P18887 AL590763.1-201ENST00000398297 1545 ntBASIC5.31□□□□□ -1.56
XRCC1P18887 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.31□□□□□ -1.56
XRCC1P18887 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
XRCC1P18887 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
XRCC1P18887 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
XRCC1P18887 AC003973.3-201ENST00000624863 2822 ntBASIC5.31□□□□□ -1.56
XRCC1P18887 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.31□□□□□ -1.56
XRCC1P18887 AC144833.1-201ENST00000567953 4089 ntBASIC5.31□□□□□ -1.56
XRCC1P18887 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
XRCC1P18887 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
XRCC1P18887 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.3□□□□□ -1.56
XRCC1P18887 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
XRCC1P18887 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
XRCC1P18887 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
XRCC1P18887 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
XRCC1P18887 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
XRCC1P18887 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
XRCC1P18887 AC005294.1-201ENST00000355509 281 ntBASIC5.3□□□□□ -1.56
XRCC1P18887 MIR133B-201ENST00000362210 119 ntBASIC5.3□□□□□ -1.56
XRCC1P18887 SNORA16A-201ENST00000384342 137 ntBASIC5.3□□□□□ -1.56
XRCC1P18887 RNA5SP339-201ENST00000390987 122 ntBASIC5.3□□□□□ -1.56
XRCC1P18887 AC211486.3-201ENST00000412694 621 ntBASIC5.3□□□□□ -1.56
XRCC1P18887 AL121878.1-201ENST00000418638 859 ntBASIC5.3□□□□□ -1.56
XRCC1P18887 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.3□□□□□ -1.56
XRCC1P18887 AL355994.1-201ENST00000424379 260 ntBASIC5.3□□□□□ -1.56
XRCC1P18887 RPL7AP49-201ENST00000429522 581 ntBASIC5.3□□□□□ -1.56
XRCC1P18887 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
XRCC1P18887 AL591438.1-201ENST00000433508 581 ntBASIC5.3□□□□□ -1.56
XRCC1P18887 AL627308.1-201ENST00000435693 821 ntBASIC5.3□□□□□ -1.56
XRCC1P18887 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.3□□□□□ -1.56
XRCC1P18887 PRPF38AP1-201ENST00000451976 933 ntBASIC5.3□□□□□ -1.56
XRCC1P18887 AC245028.2-201ENST00000458673 253 ntBASIC5.3□□□□□ -1.56
XRCC1P18887 AC110749.1-201ENST00000462007 357 ntBASIC5.3□□□□□ -1.56
XRCC1P18887 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.3□□□□□ -1.56
XRCC1P18887 COX6B1P2-201ENST00000489624 230 ntBASIC5.3□□□□□ -1.56
XRCC1P18887 OR2A3P-201ENST00000493774 953 ntBASIC5.3□□□□□ -1.56
XRCC1P18887 IGBP1P4-201ENST00000503202 879 ntBASIC5.3□□□□□ -1.56
XRCC1P18887 MYL12BP2-201ENST00000503948 512 ntBASIC5.3□□□□□ -1.56
XRCC1P18887 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.3□□□□□ -1.56
XRCC1P18887 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
XRCC1P18887 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.3□□□□□ -1.56
XRCC1P18887 AC027369.5-201ENST00000533838 755 ntBASIC5.3□□□□□ -1.56
XRCC1P18887 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.3□□□□□ -1.56
XRCC1P18887 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.3□□□□□ -1.56
XRCC1P18887 AC040958.1-201ENST00000561102 201 ntBASIC5.3□□□□□ -1.56
XRCC1P18887 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
XRCC1P18887 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
XRCC1P18887 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.3□□□□□ -1.56
XRCC1P18887 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.3□□□□□ -1.56
XRCC1P18887 PRPF19P1-201ENST00000584766 898 ntBASIC5.3□□□□□ -1.56
XRCC1P18887 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
XRCC1P18887 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.3□□□□□ -1.56
XRCC1P18887 AC013244.1-201ENST00000604279 193 ntBASIC5.3□□□□□ -1.56
XRCC1P18887 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.3□□□□□ -1.56
XRCC1P18887 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.3□□□□□ -1.56
XRCC1P18887 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
XRCC1P18887 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
XRCC1P18887 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
XRCC1P18887 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
XRCC1P18887 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
XRCC1P18887 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
XRCC1P18887 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
XRCC1P18887 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
XRCC1P18887 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
XRCC1P18887 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
XRCC1P18887 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
XRCC1P18887 AC007618.1-201ENST00000366455 732 ntBASIC5.29□□□□□ -1.56
XRCC1P18887 RNU6-171P-201ENST00000384354 107 ntBASIC5.29□□□□□ -1.56
XRCC1P18887 MIR223-201ENST00000385204 110 ntBASIC5.29□□□□□ -1.56
XRCC1P18887 AL133388.1-201ENST00000404509 287 ntBASIC5.29□□□□□ -1.56
XRCC1P18887 RPL35AP24-201ENST00000413846 330 ntBASIC5.29□□□□□ -1.56
XRCC1P18887 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.29□□□□□ -1.56
XRCC1P18887 GNG5P5-201ENST00000420444 220 ntBASIC5.29□□□□□ -1.56
XRCC1P18887 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.29□□□□□ -1.56
XRCC1P18887 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.29□□□□□ -1.56
XRCC1P18887 OR6C71P-201ENST00000432580 913 ntBASIC5.29□□□□□ -1.56
XRCC1P18887 GSTM5P1-201ENST00000434751 660 ntBASIC5.29□□□□□ -1.56
XRCC1P18887 RPS11P7-201ENST00000442125 465 ntBASIC5.29□□□□□ -1.56
XRCC1P18887 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.29□□□□□ -1.56
XRCC1P18887 RN7SL172P-201ENST00000460535 303 ntBASIC5.29□□□□□ -1.56
XRCC1P18887 AC021660.1-201ENST00000465006 554 ntBASIC5.29□□□□□ -1.56
XRCC1P18887 RN7SL799P-201ENST00000475891 298 ntBASIC5.29□□□□□ -1.56
XRCC1P18887 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.29□□□□□ -1.56
XRCC1P18887 RPEP1-201ENST00000504507 658 ntBASIC5.29□□□□□ -1.56
XRCC1P18887 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.29□□□□□ -1.56
XRCC1P18887 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.29□□□□□ -1.56
XRCC1P18887 HMGB1P40-201ENST00000525121 540 ntBASIC5.29□□□□□ -1.56
XRCC1P18887 AC234775.3-201ENST00000564612 656 ntBASIC5.29□□□□□ -1.56
XRCC1P18887 AC005341.1-201ENST00000571086 708 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms