Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 RAB28P2-201ENST00000454299 641 ntBASIC5.91□□□□□ -1.46
TRIM38O00635 RPS26P39-201ENST00000469206 341 ntBASIC5.91□□□□□ -1.46
TRIM38O00635 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.91□□□□□ -1.46
TRIM38O00635 AC124945.1-201ENST00000485133 188 ntBASIC5.91□□□□□ -1.46
TRIM38O00635 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.91□□□□□ -1.46
TRIM38O00635 AC073610.1-201ENST00000489971 396 ntBASIC5.91□□□□□ -1.46
TRIM38O00635 AL136038.1-201ENST00000497246 351 ntBASIC5.91□□□□□ -1.46
TRIM38O00635 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.91□□□□□ -1.46
TRIM38O00635 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.91□□□□□ -1.46
TRIM38O00635 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.91□□□□□ -1.46
TRIM38O00635 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.91□□□□□ -1.46
TRIM38O00635 AC097486.1-201ENST00000515331 210 ntBASIC5.91□□□□□ -1.46
TRIM38O00635 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.91□□□□□ -1.46
TRIM38O00635 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.91□□□□□ -1.46
TRIM38O00635 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.91□□□□□ -1.46
TRIM38O00635 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.91□□□□□ -1.46
TRIM38O00635 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.91□□□□□ -1.46
TRIM38O00635 MIR4489-201ENST00000578869 62 ntBASIC5.91□□□□□ -1.46
TRIM38O00635 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.91□□□□□ -1.46
TRIM38O00635 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM38O00635 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM38O00635 SUMO2P14-201ENST00000604488 293 ntBASIC5.91□□□□□ -1.46
TRIM38O00635 AC141002.1-201ENST00000607025 279 ntBASIC5.91□□□□□ -1.46
TRIM38O00635 AL136131.3-201ENST00000607600 188 ntBASIC5.91□□□□□ -1.46
TRIM38O00635 AC022960.3-201ENST00000619794 441 ntBASIC5.91□□□□□ -1.46
TRIM38O00635 AL137067.2-201ENST00000621202 131 ntBASIC5.91□□□□□ -1.46
TRIM38O00635 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.91□□□□□ -1.46
TRIM38O00635 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM38O00635 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM38O00635 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
TRIM38O00635 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.91□□□□□ -1.46
TRIM38O00635 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM38O00635 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
TRIM38O00635 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM38O00635 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM38O00635 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.91□□□□□ -1.46
TRIM38O00635 SEPT7P7-201ENST00000420492 1301 ntBASIC5.91□□□□□ -1.46
TRIM38O00635 AC092451.3-201ENST00000625067 1343 ntBASIC5.91□□□□□ -1.46
TRIM38O00635 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM38O00635 AC138907.8-201ENST00000623981 2256 ntBASIC5.91□□□□□ -1.46
TRIM38O00635 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
TRIM38O00635 CASC19-260ENST00000641828 2001 ntBASIC5.91□□□□□ -1.46
TRIM38O00635 AL359091.1-201ENST00000449048 1734 ntBASIC5.91□□□□□ -1.46
TRIM38O00635 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
TRIM38O00635 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM38O00635 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
TRIM38O00635 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM38O00635 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM38O00635 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
TRIM38O00635 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM38O00635 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
TRIM38O00635 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM38O00635 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.9□□□□□ -1.46
TRIM38O00635 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
TRIM38O00635 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM38O00635 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
TRIM38O00635 RPS3AP2-201ENST00000407190 754 ntBASIC5.9□□□□□ -1.46
TRIM38O00635 RN7SKP293-201ENST00000411389 296 ntBASIC5.9□□□□□ -1.46
TRIM38O00635 SDHDP6-201ENST00000414693 480 ntBASIC5.9□□□□□ -1.46
TRIM38O00635 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.9□□□□□ -1.46
TRIM38O00635 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.9□□□□□ -1.46
TRIM38O00635 VN1R42P-201ENST00000424651 344 ntBASIC5.9□□□□□ -1.46
TRIM38O00635 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
TRIM38O00635 HSPE1P16-201ENST00000426640 348 ntBASIC5.9□□□□□ -1.46
TRIM38O00635 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.9□□□□□ -1.46
TRIM38O00635 RPL5P2-201ENST00000429598 854 ntBASIC5.9□□□□□ -1.46
TRIM38O00635 GAPDHP48-201ENST00000436626 961 ntBASIC5.9□□□□□ -1.46
TRIM38O00635 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.9□□□□□ -1.46
TRIM38O00635 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
TRIM38O00635 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.9□□□□□ -1.46
TRIM38O00635 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.9□□□□□ -1.46
TRIM38O00635 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.9□□□□□ -1.46
TRIM38O00635 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.9□□□□□ -1.46
TRIM38O00635 FCF1P6-201ENST00000456841 595 ntBASIC5.9□□□□□ -1.46
TRIM38O00635 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
TRIM38O00635 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.9□□□□□ -1.46
TRIM38O00635 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM38O00635 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.9□□□□□ -1.46
TRIM38O00635 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.9□□□□□ -1.46
TRIM38O00635 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.9□□□□□ -1.46
TRIM38O00635 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.9□□□□□ -1.46
TRIM38O00635 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.9□□□□□ -1.46
TRIM38O00635 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.9□□□□□ -1.46
TRIM38O00635 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.9□□□□□ -1.46
TRIM38O00635 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.9□□□□□ -1.46
TRIM38O00635 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.9□□□□□ -1.46
TRIM38O00635 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM38O00635 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM38O00635 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.9□□□□□ -1.46
TRIM38O00635 RNU4ATAC-201ENST00000580972 127 ntBASIC5.9□□□□□ -1.46
TRIM38O00635 AC124283.4-201ENST00000581815 456 ntBASIC5.9□□□□□ -1.46
TRIM38O00635 MIR3176-201ENST00000582210 90 ntBASIC5.9□□□□□ -1.46
TRIM38O00635 MIR4443-201ENST00000585052 53 ntBASIC5.9□□□□□ -1.46
TRIM38O00635 AC245884.10-201ENST00000597355 337 ntBASIC5.9□□□□□ -1.46
TRIM38O00635 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.9□□□□□ -1.46
TRIM38O00635 AC097504.2-201ENST00000608088 454 ntBASIC5.9□□□□□ -1.46
TRIM38O00635 AC006946.3-201ENST00000609791 756 ntBASIC5.9□□□□□ -1.46
TRIM38O00635 AC093783.1-201ENST00000612976 329 ntBASIC5.9□□□□□ -1.46
TRIM38O00635 AC008759.3-201ENST00000613300 508 ntBASIC5.9□□□□□ -1.46
TRIM38O00635 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms