Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.49□□□□□ -1.69
SRRM4A7MD48 RPSAP35-201ENST00000413753 818 ntBASIC4.49□□□□□ -1.69
SRRM4A7MD48 AC019070.1-201ENST00000415008 1024 ntBASIC4.49□□□□□ -1.69
SRRM4A7MD48 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.49□□□□□ -1.69
SRRM4A7MD48 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.49□□□□□ -1.69
SRRM4A7MD48 AL136231.1-201ENST00000429407 730 ntBASIC4.49□□□□□ -1.69
SRRM4A7MD48 AC022022.1-201ENST00000430304 178 ntBASIC4.49□□□□□ -1.69
SRRM4A7MD48 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.49□□□□□ -1.69
SRRM4A7MD48 CYCSP11-201ENST00000436426 315 ntBASIC4.49□□□□□ -1.69
SRRM4A7MD48 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.49□□□□□ -1.69
SRRM4A7MD48 CACYBPP1-201ENST00000438592 684 ntBASIC4.49□□□□□ -1.69
SRRM4A7MD48 AL359265.1-201ENST00000440296 795 ntBASIC4.49□□□□□ -1.69
SRRM4A7MD48 AC022431.1-201ENST00000450941 438 ntBASIC4.49□□□□□ -1.69
SRRM4A7MD48 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.49□□□□□ -1.69
SRRM4A7MD48 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.49□□□□□ -1.69
SRRM4A7MD48 AC096741.1-201ENST00000472250 846 ntBASIC4.49□□□□□ -1.69
SRRM4A7MD48 AC037198.2-201ENST00000478845 733 ntBASIC4.49□□□□□ -1.69
SRRM4A7MD48 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.49□□□□□ -1.69
SRRM4A7MD48 RPS3AP15-201ENST00000483874 781 ntBASIC4.49□□□□□ -1.69
SRRM4A7MD48 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.49□□□□□ -1.69
SRRM4A7MD48 NPM1P28-201ENST00000492269 840 ntBASIC4.49□□□□□ -1.69
SRRM4A7MD48 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.49□□□□□ -1.69
SRRM4A7MD48 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.49□□□□□ -1.69
SRRM4A7MD48 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC4.49□□□□□ -1.69
SRRM4A7MD48 RNA5SP271-201ENST00000516700 88 ntBASIC4.49□□□□□ -1.69
SRRM4A7MD48 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.49□□□□□ -1.69
SRRM4A7MD48 OR4A17P-201ENST00000526032 904 ntBASIC4.49□□□□□ -1.69
SRRM4A7MD48 HMGB1P42-201ENST00000532126 553 ntBASIC4.49□□□□□ -1.69
SRRM4A7MD48 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.49□□□□□ -1.69
SRRM4A7MD48 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.49□□□□□ -1.69
SRRM4A7MD48 CD24P2-201ENST00000565486 219 ntBASIC4.49□□□□□ -1.69
SRRM4A7MD48 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.49□□□□□ -1.69
SRRM4A7MD48 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.49□□□□□ -1.69
SRRM4A7MD48 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.49□□□□□ -1.69
SRRM4A7MD48 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.49□□□□□ -1.69
SRRM4A7MD48 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.49□□□□□ -1.69
SRRM4A7MD48 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.49□□□□□ -1.69
SRRM4A7MD48 AL139124.1-201ENST00000609123 421 ntBASIC4.49□□□□□ -1.69
SRRM4A7MD48 AC129915.3-201ENST00000634128 948 ntBASIC4.49□□□□□ -1.69
SRRM4A7MD48 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.49□□□□□ -1.69
SRRM4A7MD48 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
SRRM4A7MD48 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.49□□□□□ -1.69
SRRM4A7MD48 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
SRRM4A7MD48 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SRRM4A7MD48 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.49□□□□□ -1.69
SRRM4A7MD48 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SRRM4A7MD48 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
SRRM4A7MD48 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SRRM4A7MD48 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SRRM4A7MD48 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SRRM4A7MD48 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
SRRM4A7MD48 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.49□□□□□ -1.69
SRRM4A7MD48 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SRRM4A7MD48 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SRRM4A7MD48 AC005005.4-201ENST00000623789 16698 ntBASIC4.48□□□□□ -1.69
SRRM4A7MD48 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.48□□□□□ -1.69
SRRM4A7MD48 AL359715.4-201ENST00000606629 1436 ntBASIC4.48□□□□□ -1.69
SRRM4A7MD48 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.48□□□□□ -1.69
SRRM4A7MD48 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
SRRM4A7MD48 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
SRRM4A7MD48 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SRRM4A7MD48 SRRM1P3-201ENST00000426911 2678 ntBASIC4.48□□□□□ -1.69
SRRM4A7MD48 RNA5SP394-201ENST00000364216 119 ntBASIC4.48□□□□□ -1.69
SRRM4A7MD48 RN7SKP81-201ENST00000365603 331 ntBASIC4.48□□□□□ -1.69
SRRM4A7MD48 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.48□□□□□ -1.69
SRRM4A7MD48 SNORA70.6-201ENST00000383934 134 ntBASIC4.48□□□□□ -1.69
SRRM4A7MD48 HMGB1P10-201ENST00000395823 563 ntBASIC4.48□□□□□ -1.69
SRRM4A7MD48 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
SRRM4A7MD48 HMGB1P20-201ENST00000402555 677 ntBASIC4.48□□□□□ -1.69
SRRM4A7MD48 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.48□□□□□ -1.69
SRRM4A7MD48 RMRPP5-201ENST00000411156 267 ntBASIC4.48□□□□□ -1.69
SRRM4A7MD48 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.48□□□□□ -1.69
SRRM4A7MD48 AL121882.1-201ENST00000422893 417 ntBASIC4.48□□□□□ -1.69
SRRM4A7MD48 AC007161.1-204ENST00000423039 460 ntBASIC4.48□□□□□ -1.69
SRRM4A7MD48 RIMKLBP2-201ENST00000424737 654 ntBASIC4.48□□□□□ -1.69
SRRM4A7MD48 AL390879.2-203ENST00000426943 1121 ntBASIC4.48□□□□□ -1.69
SRRM4A7MD48 AL160175.1-201ENST00000428124 247 ntBASIC4.48□□□□□ -1.69
SRRM4A7MD48 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.48□□□□□ -1.69
SRRM4A7MD48 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.48□□□□□ -1.69
SRRM4A7MD48 AC006335.2-201ENST00000437993 330 ntBASIC4.48□□□□□ -1.69
SRRM4A7MD48 DNAJA1P5-201ENST00000440278 943 ntBASIC4.48□□□□□ -1.69
SRRM4A7MD48 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.48□□□□□ -1.69
SRRM4A7MD48 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.48□□□□□ -1.69
SRRM4A7MD48 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.48□□□□□ -1.69
SRRM4A7MD48 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.48□□□□□ -1.69
SRRM4A7MD48 AC011476.1-201ENST00000466725 307 ntBASIC4.48□□□□□ -1.69
SRRM4A7MD48 NPM1P17-201ENST00000479221 602 ntBASIC4.48□□□□□ -1.69
SRRM4A7MD48 AC087672.1-201ENST00000479876 766 ntBASIC4.48□□□□□ -1.69
SRRM4A7MD48 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.48□□□□□ -1.69
SRRM4A7MD48 RN7SL649P-201ENST00000496974 275 ntBASIC4.48□□□□□ -1.69
SRRM4A7MD48 AC010468.3-201ENST00000508225 458 ntBASIC4.48□□□□□ -1.69
SRRM4A7MD48 IMPA1P1-201ENST00000510718 842 ntBASIC4.48□□□□□ -1.69
SRRM4A7MD48 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.48□□□□□ -1.69
SRRM4A7MD48 AC027338.1-201ENST00000514840 825 ntBASIC4.48□□□□□ -1.69
SRRM4A7MD48 SNORA70.20-201ENST00000516848 126 ntBASIC4.48□□□□□ -1.69
SRRM4A7MD48 SNORA76.2-201ENST00000517095 137 ntBASIC4.48□□□□□ -1.69
SRRM4A7MD48 AC079064.1-201ENST00000528365 362 ntBASIC4.48□□□□□ -1.69
SRRM4A7MD48 AP003049.1-201ENST00000529418 457 ntBASIC4.48□□□□□ -1.69
SRRM4A7MD48 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.48□□□□□ -1.69
SRRM4A7MD48 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms