Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 MTND5P23-201ENST00000430812 1655 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 SNORD1C-201ENST00000363315 78 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 GAPDHP42-201ENST00000406848 981 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 RN7SKP278-201ENST00000410504 342 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 RPL26P37-201ENST00000411983 438 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 AL024507.1-201ENST00000412741 274 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 AC011242.1-201ENST00000433596 1158 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 LYPLA1P1-201ENST00000434514 622 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 OR7E116P-201ENST00000448529 957 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 OSTCP1-201ENST00000455507 450 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 RPS23P2-201ENST00000463671 415 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 AC006539.1-201ENST00000481419 501 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 RPS3AP15-201ENST00000483874 781 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 AC008638.1-201ENST00000506035 866 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 NRBF2P4-201ENST00000520874 850 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 HAUS1P3-201ENST00000523909 662 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 AC090424.1-201ENST00000535243 736 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 AC106730.2-201ENST00000566641 540 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 MRPS21P7-201ENST00000566937 238 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 AC015720.2-201ENST00000567709 334 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 AL359715.3-201ENST00000569267 2123 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 FAM106CP-201ENST00000582212 507 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 AC005034.4-201ENST00000603612 899 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 SUMO2P15-201ENST00000604285 278 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 AC090912.3-201ENST00000609775 533 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 SDR42E1P1-201ENST00000611327 477 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 AL031658.2-201ENST00000616850 651 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 AL355974.3-201ENST00000617383 467 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 AC018628.1-201ENST00000624147 3819 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 AC092159.4-201ENST00000624944 550 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 OR4G3P-201ENST00000633500 913 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 AC012078.1-201ENST00000405035 1646 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 AC022164.1-201ENST00000568767 2673 ntBASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TBC1D3FA6NER0 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TBC1D3FA6NER0 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.69□□□□□ -1.5
TBC1D3FA6NER0 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.69□□□□□ -1.5
TBC1D3FA6NER0 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.69□□□□□ -1.5
TBC1D3FA6NER0 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TBC1D3FA6NER0 AC245100.2-201ENST00000454544 1679 ntBASIC5.69□□□□□ -1.5
TBC1D3FA6NER0 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.69□□□□□ -1.5
TBC1D3FA6NER0 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TBC1D3FA6NER0 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TBC1D3FA6NER0 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.69□□□□□ -1.5
TBC1D3FA6NER0 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TBC1D3FA6NER0 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TBC1D3FA6NER0 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TBC1D3FA6NER0 RNA5SP319-201ENST00000362768 119 ntBASIC5.69□□□□□ -1.5
TBC1D3FA6NER0 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TBC1D3FA6NER0 RPS26P38-201ENST00000414476 348 ntBASIC5.69□□□□□ -1.5
TBC1D3FA6NER0 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.69□□□□□ -1.5
TBC1D3FA6NER0 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.69□□□□□ -1.5
TBC1D3FA6NER0 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.69□□□□□ -1.5
TBC1D3FA6NER0 CFL1P1-202ENST00000432948 411 ntBASIC5.69□□□□□ -1.5
TBC1D3FA6NER0 AC096775.1-201ENST00000437724 448 ntBASIC5.69□□□□□ -1.5
TBC1D3FA6NER0 AL163193.1-201ENST00000444895 788 ntBASIC5.69□□□□□ -1.5
TBC1D3FA6NER0 REG1CP-206ENST00000447469 496 ntBASIC5.69□□□□□ -1.5
TBC1D3FA6NER0 AL606490.1-201ENST00000452266 765 ntBASIC5.69□□□□□ -1.5
TBC1D3FA6NER0 AC004129.2-201ENST00000457229 287 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 150.4 ms