Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC187A0A096LP49 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC187A0A096LP49 FAM106CP-201ENST00000582212 507 ntBASIC5.63□□□□□ -1.51
CCDC187A0A096LP49 MIR4260-201ENST00000583107 67 ntBASIC5.63□□□□□ -1.51
CCDC187A0A096LP49 AC011497.2-201ENST00000600255 639 ntBASIC5.63□□□□□ -1.51
CCDC187A0A096LP49 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC187A0A096LP49 AC091193.1-201ENST00000604640 448 ntBASIC5.63□□□□□ -1.51
CCDC187A0A096LP49 AC145423.1-201ENST00000605712 336 ntBASIC5.63□□□□□ -1.51
CCDC187A0A096LP49 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC187A0A096LP49 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC187A0A096LP49 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC187A0A096LP49 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC187A0A096LP49 CU459211.1-201ENST00000635667 749 ntBASIC5.63□□□□□ -1.51
CCDC187A0A096LP49 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC187A0A096LP49 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC187A0A096LP49 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC187A0A096LP49 AL592429.1-201ENST00000403909 1473 ntBASIC5.63□□□□□ -1.51
CCDC187A0A096LP49 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC187A0A096LP49 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
CCDC187A0A096LP49 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC187A0A096LP49 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC187A0A096LP49 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC187A0A096LP49 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC187A0A096LP49 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.63□□□□□ -1.51
CCDC187A0A096LP49 AL022393.1-201ENST00000625142 1677 ntBASIC5.63□□□□□ -1.51
CCDC187A0A096LP49 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC187A0A096LP49 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 AC107021.2-201ENST00000567714 2095 ntBASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 RNU6-796P-201ENST00000391086 107 ntBASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 RNU2-17P-201ENST00000410290 190 ntBASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 AL596448.1-201ENST00000415024 392 ntBASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 VPS26BP1-201ENST00000417155 755 ntBASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 RPS4XP5-201ENST00000419038 768 ntBASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 AC099677.3-201ENST00000427081 395 ntBASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 MTCO1P43-201ENST00000431831 488 ntBASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 AC044797.1-201ENST00000445744 679 ntBASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 AL139824.2-201ENST00000458731 1095 ntBASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 RN7SL610P-201ENST00000463845 291 ntBASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 RN7SL515P-201ENST00000463999 297 ntBASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 TPT1P3-201ENST00000492841 512 ntBASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 HAUS1P3-201ENST00000523909 662 ntBASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 AC118942.1-201ENST00000529674 1035 ntBASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 HMGB1P42-201ENST00000532126 553 ntBASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 AC027026.1-201ENST00000532323 742 ntBASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 AL021368.3-201ENST00000607119 578 ntBASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 AL157392.4-201ENST00000609756 345 ntBASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 AL512427.1-201ENST00000618593 349 ntBASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 AL109659.3-201ENST00000624985 950 ntBASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 AL442128.2-201ENST00000620246 1824 ntBASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 IMMTP1-201ENST00000435590 2219 ntBASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 AL137141.1-201ENST00000624622 4836 ntBASIC5.62□□□□□ -1.51
CCDC187A0A096LP49 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CCDC187A0A096LP49 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC187A0A096LP49 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC187A0A096LP49 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CCDC187A0A096LP49 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC187A0A096LP49 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC187A0A096LP49 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC187A0A096LP49 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms