Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 SNORA2.3-201ENST00000383920 135 ntBASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 RPL35AP24-201ENST00000413846 330 ntBASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 AL513325.1-201ENST00000417716 1034 ntBASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 RN7SL717P-201ENST00000478343 297 ntBASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 SIAH1P1-201ENST00000479411 923 ntBASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 AC105031.1-201ENST00000518550 476 ntBASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 AP006245.2-201ENST00000522004 300 ntBASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 AP005432.2-201ENST00000608162 586 ntBASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 AC037198.3-201ENST00000616754 526 ntBASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 MIR6861-201ENST00000618657 64 ntBASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 AC008079.2-201ENST00000623543 20396 ntBASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 CASC19-221ENST00000641309 1382 ntBASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 AC120036.2-201ENST00000509729 1474 ntBASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 AC011447.7-201ENST00000624228 1590 ntBASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 SNORA17A-201ENST00000391185 133 ntBASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 RN7SKP59-201ENST00000410520 314 ntBASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 AC093655.2-201ENST00000425735 631 ntBASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 RPS4XP16-201ENST00000427198 791 ntBASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 AC104843.2-201ENST00000427666 297 ntBASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 COX6CP13-201ENST00000428703 226 ntBASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 GAPDHP34-201ENST00000432112 823 ntBASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 MRPL35P2-201ENST00000448009 511 ntBASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 AC023141.9-201ENST00000458734 412 ntBASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 AC090568.1-201ENST00000509499 856 ntBASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 RNA5SP362-201ENST00000516048 118 ntBASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 SNORA17.5-201ENST00000630429 132 ntBASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
TRAV27A0A087WT01 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 RNA5SP242-201ENST00000364171 118 ntBASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 MIR600-201ENST00000385007 98 ntBASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 MIR1182-201ENST00000408363 97 ntBASIC4.6□□□□□ -1.67
TRAV27A0A087WT01 CTSL3P-202ENST00000412179 788 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms