Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 RNA5SP234-201ENST00000363916 119 ntBASIC4.92□□□□□ -1.62
VAPAQ9P0L0 RN7SKP292-201ENST00000365522 317 ntBASIC4.92□□□□□ -1.62
VAPAQ9P0L0 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 AL035079.1-201ENST00000405210 287 ntBASIC4.92□□□□□ -1.62
VAPAQ9P0L0 AL390316.1-201ENST00000406279 553 ntBASIC4.92□□□□□ -1.62
VAPAQ9P0L0 RN7SKP240-201ENST00000410583 375 ntBASIC4.92□□□□□ -1.62
VAPAQ9P0L0 NANOGP4-201ENST00000427230 913 ntBASIC4.92□□□□□ -1.62
VAPAQ9P0L0 AC009238.2-201ENST00000431026 355 ntBASIC4.92□□□□□ -1.62
VAPAQ9P0L0 AL161722.2-201ENST00000434731 981 ntBASIC4.92□□□□□ -1.62
VAPAQ9P0L0 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 BTF3P6-201ENST00000448054 499 ntBASIC4.92□□□□□ -1.62
VAPAQ9P0L0 AC005412.2-201ENST00000492004 341 ntBASIC4.92□□□□□ -1.62
VAPAQ9P0L0 AC090638.1-201ENST00000498296 909 ntBASIC4.92□□□□□ -1.62
VAPAQ9P0L0 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 AC011840.5-201ENST00000582125 771 ntBASIC4.92□□□□□ -1.62
VAPAQ9P0L0 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 AL096712.1-201ENST00000614561 159 ntBASIC4.92□□□□□ -1.62
VAPAQ9P0L0 AC118658.2-201ENST00000618697 459 ntBASIC4.92□□□□□ -1.62
VAPAQ9P0L0 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 AL022393.1-201ENST00000625142 1677 ntBASIC4.92□□□□□ -1.62
VAPAQ9P0L0 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 AC011503.2-201ENST00000594230 1500 ntBASIC4.92□□□□□ -1.62
VAPAQ9P0L0 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
VAPAQ9P0L0 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 RPL10P10-201ENST00000403509 664 ntBASIC4.91□□□□□ -1.62
VAPAQ9P0L0 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 AL390119.1-201ENST00000440329 312 ntBASIC4.91□□□□□ -1.62
VAPAQ9P0L0 GTF3AP5-201ENST00000442645 697 ntBASIC4.91□□□□□ -1.62
VAPAQ9P0L0 EIF4E2P2-201ENST00000492033 736 ntBASIC4.91□□□□□ -1.62
VAPAQ9P0L0 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 TOMM20P1-201ENST00000534518 427 ntBASIC4.91□□□□□ -1.62
VAPAQ9P0L0 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.91□□□□□ -1.62
VAPAQ9P0L0 AC015720.2-201ENST00000567709 334 ntBASIC4.91□□□□□ -1.62
VAPAQ9P0L0 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 MIR1273E-201ENST00000581165 102 ntBASIC4.91□□□□□ -1.62
VAPAQ9P0L0 AC134669.1-201ENST00000581275 672 ntBASIC4.91□□□□□ -1.62
VAPAQ9P0L0 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 BNIP3P35-201ENST00000604530 490 ntBASIC4.91□□□□□ -1.62
VAPAQ9P0L0 MIR6071-201ENST00000616741 78 ntBASIC4.91□□□□□ -1.62
VAPAQ9P0L0 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
VAPAQ9P0L0 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
VAPAQ9P0L0 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.9□□□□□ -1.62
VAPAQ9P0L0 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.62
VAPAQ9P0L0 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.62
VAPAQ9P0L0 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
VAPAQ9P0L0 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
VAPAQ9P0L0 RN7SKP74-201ENST00000362849 309 ntBASIC4.9□□□□□ -1.63
VAPAQ9P0L0 RN7SKP187-201ENST00000365536 330 ntBASIC4.9□□□□□ -1.63
VAPAQ9P0L0 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.9□□□□□ -1.63
VAPAQ9P0L0 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VAPAQ9P0L0 MIR105-1-201ENST00000385222 81 ntBASIC4.9□□□□□ -1.63
VAPAQ9P0L0 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
VAPAQ9P0L0 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.9□□□□□ -1.63
VAPAQ9P0L0 OR5M12P-201ENST00000423388 929 ntBASIC4.9□□□□□ -1.63
VAPAQ9P0L0 NAP1L4P2-201ENST00000425958 899 ntBASIC4.9□□□□□ -1.63
VAPAQ9P0L0 NPM1P22-201ENST00000427761 952 ntBASIC4.9□□□□□ -1.63
VAPAQ9P0L0 DSTNP5-201ENST00000427921 523 ntBASIC4.9□□□□□ -1.63
VAPAQ9P0L0 RPL35AP21-201ENST00000437667 333 ntBASIC4.9□□□□□ -1.63
VAPAQ9P0L0 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.9□□□□□ -1.63
VAPAQ9P0L0 RANP1-206ENST00000455094 651 ntBASIC4.9□□□□□ -1.63
VAPAQ9P0L0 RPL7P40-201ENST00000481703 745 ntBASIC4.9□□□□□ -1.63
VAPAQ9P0L0 AC097173.1-201ENST00000505862 819 ntBASIC4.9□□□□□ -1.63
VAPAQ9P0L0 AC074087.1-201ENST00000512059 724 ntBASIC4.9□□□□□ -1.63
VAPAQ9P0L0 RN7SKP5-201ENST00000517045 272 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms