Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC105254.2-201ENST00000603636 436 ntBASIC4.9□□□□□ -1.63
CHD8Q9HCK8 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.9□□□□□ -1.63
CHD8Q9HCK8 AL121890.3-201ENST00000618494 516 ntBASIC4.9□□□□□ -1.63
CHD8Q9HCK8 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CHD8Q9HCK8 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CHD8Q9HCK8 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CHD8Q9HCK8 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CHD8Q9HCK8 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 AL589993.1-201ENST00000407450 2524 ntBASIC4.89□□□□□ -1.63
CHD8Q9HCK8 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 CYCSP19-201ENST00000411715 316 ntBASIC4.89□□□□□ -1.63
CHD8Q9HCK8 HYALP1-201ENST00000417674 1279 ntBASIC4.89□□□□□ -1.63
CHD8Q9HCK8 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 YME1L1P1-201ENST00000429435 297 ntBASIC4.89□□□□□ -1.63
CHD8Q9HCK8 CBX1P1-201ENST00000440184 427 ntBASIC4.89□□□□□ -1.63
CHD8Q9HCK8 AP001880.2-201ENST00000538233 448 ntBASIC4.89□□□□□ -1.63
CHD8Q9HCK8 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.89□□□□□ -1.63
CHD8Q9HCK8 AL138721.1-201ENST00000616756 179 ntBASIC4.89□□□□□ -1.63
CHD8Q9HCK8 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 AC068446.1-201ENST00000556425 1549 ntBASIC4.89□□□□□ -1.63
CHD8Q9HCK8 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 SNORD113.2-201ENST00000364166 89 ntBASIC4.89□□□□□ -1.63
CHD8Q9HCK8 RNA5SP317-201ENST00000410176 116 ntBASIC4.89□□□□□ -1.63
CHD8Q9HCK8 RNA5SP311-201ENST00000411290 116 ntBASIC4.89□□□□□ -1.63
CHD8Q9HCK8 AL390879.2-203ENST00000426943 1121 ntBASIC4.89□□□□□ -1.63
CHD8Q9HCK8 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 MTCO1P54-201ENST00000430139 712 ntBASIC4.89□□□□□ -1.63
CHD8Q9HCK8 ARL2BPP10-201ENST00000446487 531 ntBASIC4.89□□□□□ -1.63
CHD8Q9HCK8 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.89□□□□□ -1.63
CHD8Q9HCK8 CDH12P2-201ENST00000504393 298 ntBASIC4.89□□□□□ -1.63
CHD8Q9HCK8 RNA5SP315-201ENST00000516340 116 ntBASIC4.89□□□□□ -1.63
CHD8Q9HCK8 RNA5SP312-201ENST00000517068 116 ntBASIC4.89□□□□□ -1.63
CHD8Q9HCK8 OR7E128P-201ENST00000532736 1024 ntBASIC4.89□□□□□ -1.63
CHD8Q9HCK8 AP005403.1-201ENST00000579720 229 ntBASIC4.89□□□□□ -1.63
CHD8Q9HCK8 AC098935.2-201ENST00000604222 466 ntBASIC4.89□□□□□ -1.63
CHD8Q9HCK8 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 AC010928.1-201ENST00000592477 1447 ntBASIC4.89□□□□□ -1.63
CHD8Q9HCK8 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC4.89□□□□□ -1.63
CHD8Q9HCK8 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 AL354766.1-201ENST00000423396 542 ntBASIC4.88□□□□□ -1.63
CHD8Q9HCK8 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 OR1H1P-201ENST00000448731 937 ntBASIC4.88□□□□□ -1.63
CHD8Q9HCK8 RPL23AP24-201ENST00000458203 385 ntBASIC4.88□□□□□ -1.63
CHD8Q9HCK8 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 RN7SL429P-201ENST00000479090 223 ntBASIC4.88□□□□□ -1.63
CHD8Q9HCK8 RN7SL489P-201ENST00000486185 223 ntBASIC4.88□□□□□ -1.63
CHD8Q9HCK8 RN7SL327P-201ENST00000488659 223 ntBASIC4.88□□□□□ -1.63
CHD8Q9HCK8 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 CYP4F27P-201ENST00000514557 494 ntBASIC4.88□□□□□ -1.63
CHD8Q9HCK8 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 BNIP3P10-201ENST00000605360 577 ntBASIC4.88□□□□□ -1.63
CHD8Q9HCK8 RN7SL853P-201ENST00000617250 223 ntBASIC4.88□□□□□ -1.63
CHD8Q9HCK8 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CHD8Q9HCK8 MAPK10-371ENST00000641952 5209 ntBASIC4.88□□□□□ -1.63
CHD8Q9HCK8 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms