Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 FABP5P2-201ENST00000439042 408 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AL121578.2-201ENST00000448797 447 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 UBDP1-202ENST00000457888 382 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 RN7SL393P-201ENST00000463588 296 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 RPS3AP49-201ENST00000472161 790 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 RPL7AP23-201ENST00000482625 776 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 MTCO2P30-201ENST00000503662 364 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 RN7SKP196-201ENST00000516267 345 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 RNU6-506P-201ENST00000516553 94 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AP003033.2-201ENST00000528901 805 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AC104383.1-201ENST00000530297 370 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AC004217.3-201ENST00000551552 878 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AC020765.1-201ENST00000604296 328 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 WBP1LP12-201ENST00000604449 331 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 MIR6885-201ENST00000612241 66 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 Y_RNA.804-201ENST00000615262 101 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AC010133.1-201ENST00000615809 842 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AC006328.2-201ENST00000623198 397 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AC112204.3-201ENST00000623822 332 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AC012005.2-201ENST00000624333 397 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AC116618.1-201ENST00000634617 774 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AC007603.3-201ENST00000636915 979 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 RBPJP6-201ENST00000411556 1431 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AC005539.1-201ENST00000443768 1479 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 ELF2P3-201ENST00000445099 1506 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 CASC19-243ENST00000641588 1546 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 CUL4AP1-201ENST00000514750 1863 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 MROH3P-201ENST00000435735 2676 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 RNU6-560P-201ENST00000364007 108 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 RNU1-55P-201ENST00000365510 158 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 RNU6-253P-201ENST00000384730 105 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 TAF9BP1-201ENST00000396646 746 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 FDPSP5-201ENST00000399474 1057 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 ARL4AP5-201ENST00000404372 599 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 AL139098.1-201ENST00000407291 389 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 TCEA1P4-201ENST00000415066 844 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms