Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 SNORD46.2-201ENST00000516021 102 ntBASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 TRAV11-201ENST00000539512 339 ntBASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 RPL10P14-201ENST00000565265 298 ntBASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 MIR1273E-201ENST00000581165 102 ntBASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 MIR4505-201ENST00000582238 73 ntBASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 AC006484.1-201ENST00000435086 1884 ntBASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HDHD3Q9BSH5 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 AC008079.2-201ENST00000623543 20396 ntBASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 RNA5SP319-201ENST00000362768 119 ntBASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 RNA5SP335-201ENST00000363817 110 ntBASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 IPPKP1-201ENST00000422501 768 ntBASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 AC064862.4-201ENST00000442180 334 ntBASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 RNU7-157P-201ENST00000459600 66 ntBASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 AC020937.1-201ENST00000519677 1013 ntBASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 HMGB1P40-201ENST00000525121 540 ntBASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 AC024405.1-201ENST00000532521 1042 ntBASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 AC135626.1-201ENST00000556983 435 ntBASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 AC118658.2-201ENST00000618697 459 ntBASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 AP000648.2-201ENST00000624182 404 ntBASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HDHD3Q9BSH5 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 AC023490.2-201ENST00000359859 470 ntBASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 RNU1-77P-201ENST00000390868 162 ntBASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 OR5M12P-201ENST00000423388 929 ntBASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 DSTNP5-201ENST00000427921 523 ntBASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 AC012075.1-201ENST00000436549 580 ntBASIC4.35□□□□□ -1.71
HDHD3Q9BSH5 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms