Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC121334.2-201ENST00000605387 271 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 RNU6-89P-201ENST00000606519 100 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 OR10AB1P-201ENST00000609613 938 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 AC131159.2-201ENST00000613236 702 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 CSTL1-205ENST00000619238 477 ntTSL 5 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 Metazoa_SRP.42-201ENST00000621081 348 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 AC012100.3-201ENST00000624738 575 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 LINC01002-216ENST00000632351 572 ntTSL 5 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 AL158175.1-201ENST00000634327 1127 ntTSL 5 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
USB1Q9BQ65 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
USB1Q9BQ65 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
USB1Q9BQ65 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
USB1Q9BQ65 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
USB1Q9BQ65 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
USB1Q9BQ65 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
USB1Q9BQ65 GTF3C3-201ENST00000263956 4282 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
USB1Q9BQ65 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
USB1Q9BQ65 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
USB1Q9BQ65 AC008817.1-201ENST00000504215 1562 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 PIK3C3-204ENST00000586545 1554 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
USB1Q9BQ65 MITF-202ENST00000314589 1993 ntTSL 2 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
USB1Q9BQ65 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
USB1Q9BQ65 RPS4X-201ENST00000316084 1526 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
USB1Q9BQ65 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
USB1Q9BQ65 AC025125.1-201ENST00000624743 1922 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
USB1Q9BQ65 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
USB1Q9BQ65 ZNF185-203ENST00000324823 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
USB1Q9BQ65 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
USB1Q9BQ65 ZNF169-203ENST00000480716 2716 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
USB1Q9BQ65 NSD1-216ENST00000638627 1866 ntTSL 5 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 ITIH3-202ENST00000449956 3007 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
USB1Q9BQ65 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
USB1Q9BQ65 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 EEF1A1P5-201ENST00000436459 1389 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 AL137782.1-201ENST00000563635 4128 ntTSL 5 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 GBAP1-202ENST00000459805 2922 ntTSL 5 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 OR8B9P-202ENST00000642028 5216 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 CELF1-202ENST00000358597 2108 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
USB1Q9BQ65 DYNLT1-202ENST00000367088 2891 ntTSL 2 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
USB1Q9BQ65 MYO6-207ENST00000615563 4026 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
USB1Q9BQ65 AC114546.3-201ENST00000623582 1734 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
USB1Q9BQ65 ASNSP3-201ENST00000451989 1306 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 AC241584.2-201ENST00000637142 2090 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 AC093311.1-201ENST00000506586 2021 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 LL22NC03-63E9.3-201ENST00000407120 3111 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
USB1Q9BQ65 TPH2-201ENST00000333850 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
USB1Q9BQ65 AC104162.1-201ENST00000430831 2382 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
USB1Q9BQ65 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
USB1Q9BQ65 Y_RNA.112-201ENST00000363250 102 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 RNU4-20P-201ENST00000365601 151 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 MIR1-2-201ENST00000384961 85 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 SNORD37.1-201ENST00000390968 65 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 U3.23-201ENST00000391132 200 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 AL121834.1-202ENST00000404494 277 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 AC008063.1-201ENST00000418335 640 ntTSL 3 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 AC114760.1-201ENST00000420310 652 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 SNHG17-204ENST00000423536 517 ntTSL 2 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 RPL23AP4-201ENST00000427757 463 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 Z74696.1-201ENST00000428208 1123 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 AC119618.1-201ENST00000434191 222 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 CLUHP5-201ENST00000438421 774 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 LINC01185-201ENST00000439412 554 ntTSL 4 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 DDX3X-202ENST00000441189 1051 ntTSL 2 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 AL356010.1-201ENST00000456364 102 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 AL034397.1-201ENST00000456392 908 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 RPS27P12-201ENST00000464146 258 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 RN7SL146P-201ENST00000472338 297 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 ADAM3A-206ENST00000484602 1046 ntTSL 2 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 RPL34P29-201ENST00000491411 325 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 RNU6-714P-201ENST00000516963 103 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 RNU6-1220P-201ENST00000517126 108 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 AC090572.1-201ENST00000519251 160 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 AC009902.1-201ENST00000519351 183 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 IGHVIII-76-1-201ENST00000523776 286 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 LINC01499-201ENST00000528720 553 ntTSL 4 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 OR5D15P-201ENST00000531671 942 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 AC007751.2-201ENST00000534173 291 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 APOOP3-201ENST00000536787 586 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 AP002991.1-201ENST00000539305 574 ntTSL 4 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 NCAPGP2-201ENST00000557911 754 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 BCAP31P2-201ENST00000563143 399 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 BCAP31P1-201ENST00000565437 385 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 AC092287.1-201ENST00000565782 463 ntTSL 3 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 AC090312.1-201ENST00000580637 348 ntBASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms