Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 NDUFB4P2-201ENST00000509515 391 ntBASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 SAP18P1-201ENST00000512058 390 ntBASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 AC109445.1-201ENST00000512356 383 ntBASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 DCAF13P2-201ENST00000514188 555 ntBASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 RN7SKP233-201ENST00000517005 110 ntBASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 OR5M6P-201ENST00000530227 937 ntBASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 PCMTD1P2-201ENST00000565017 355 ntBASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 MIR4312-201ENST00000579909 76 ntBASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 RN7SL178P-201ENST00000582930 304 ntBASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 AC211486.4-201ENST00000621495 113 ntBASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 AC068880.5-201ENST00000624331 290 ntBASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 AP003400.3-201ENST00000624904 346 ntBASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 AC183089.2-201ENST00000637931 916 ntBASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 AC007012.2-201ENST00000623206 1676 ntBASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 CCDC150P1-201ENST00000537123 2215 ntBASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 AL669831.5-218ENST00000591702 1873 ntBASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 AC079178.2-201ENST00000439323 1624 ntBASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 EEF1A1P14-201ENST00000421195 1376 ntBASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 RNU5E-8P-201ENST00000363502 116 ntBASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 Y_RNA.315-201ENST00000365117 102 ntBASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 MIR1266-201ENST00000408125 84 ntBASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 TAF13P2-201ENST00000416876 286 ntBASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 RAC1P4-201ENST00000419413 579 ntBASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 AC092647.1-201ENST00000420654 287 ntBASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 AC006509.1-201ENST00000420788 634 ntBASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 Z82205.1-201ENST00000428456 297 ntBASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 AL365184.2-201ENST00000431139 435 ntBASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 SNRPEP4-201ENST00000435815 279 ntBASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 AC009518.3-201ENST00000438972 253 ntBASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 AL591363.1-201ENST00000450091 483 ntBASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 RPL23AP35-201ENST00000451906 501 ntBASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 RPSAP7-201ENST00000456871 885 ntBASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 AC044810.1-201ENST00000480271 711 ntBASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 OR9A1P-202ENST00000484361 945 ntBASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 AC079395.1-201ENST00000510981 262 ntBASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 ATG10-208ENST00000513634 618 ntTSL 2 BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 MTCO2P24-201ENST00000515611 426 ntBASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 OSBPL9P2-201ENST00000526582 1228 ntBASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 ASB8-207ENST00000536953 923 ntTSL 2 BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 AC137800.2-201ENST00000574375 120 ntBASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 AC245014.2-201ENST00000603689 287 ntBASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 AC246785.4-201ENST00000605374 287 ntBASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 AC009779.8-202ENST00000607990 932 ntBASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 OR51C1P-201ENST00000608504 942 ntBASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC7.49□□□□□ -1.21
NPAS3Q8IXF0 MIR6849-201ENST00000618543 69 ntBASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms