Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 5S_rRNA.20-201ENST00000612104 118 ntBASIC7.44□□□□□ -1.22
FOXR1Q6PIV2 AC135050.6-202ENST00000613584 392 ntBASIC7.44□□□□□ -1.22
FOXR1Q6PIV2 AL121985.2-201ENST00000621192 555 ntBASIC7.44□□□□□ -1.22
FOXR1Q6PIV2 AC027506.1-201ENST00000621395 198 ntBASIC7.44□□□□□ -1.22
FOXR1Q6PIV2 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC7.44□□□□□ -1.22
FOXR1Q6PIV2 AC012557.3-201ENST00000626439 255 ntBASIC7.44□□□□□ -1.22
FOXR1Q6PIV2 AC010653.3-201ENST00000635332 232 ntBASIC7.44□□□□□ -1.22
FOXR1Q6PIV2 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
FOXR1Q6PIV2 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
FOXR1Q6PIV2 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
FOXR1Q6PIV2 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
FOXR1Q6PIV2 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC7.44□□□□□ -1.22
FOXR1Q6PIV2 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.44□□□□□ -1.22
FOXR1Q6PIV2 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC7.44□□□□□ -1.22
FOXR1Q6PIV2 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC7.44□□□□□ -1.22
FOXR1Q6PIV2 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
FOXR1Q6PIV2 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 SNX18P3-202ENST00000565670 1750 ntBASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 AL034370.1-201ENST00000397254 1590 ntBASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 RPL12P13-201ENST00000310055 497 ntBASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 Y_RNA.216-201ENST00000364205 93 ntBASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 RAB5CP1-201ENST00000395972 580 ntBASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 SUMO2P13-201ENST00000403109 272 ntBASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 RPSAP72-201ENST00000407020 358 ntBASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 AL356968.2-201ENST00000412769 1257 ntBASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 RPL12P9-201ENST00000412942 488 ntBASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 RPL23AP39-201ENST00000415533 405 ntBASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 EEF1A1P34-201ENST00000419888 1267 ntBASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 AC114755.4-201ENST00000439114 443 ntBASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 FO393419.1-201ENST00000443746 355 ntBASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 BX842559.2-201ENST00000451418 605 ntBASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 AC022364.2-201ENST00000457963 554 ntBASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 AC026336.1-201ENST00000466577 351 ntBASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 TAAR3P-201ENST00000466706 1078 ntBASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 RPS10P28-201ENST00000480396 498 ntBASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 TAAR3P-202ENST00000481759 1025 ntBASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 PDLIM1P4-201ENST00000504327 1006 ntBASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 AC109445.1-201ENST00000512356 383 ntBASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 FRG2IP-201ENST00000563581 781 ntBASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 AC138749.2-201ENST00000566048 167 ntBASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 AC010487.1-201ENST00000594408 1172 ntBASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 AL035413.2-201ENST00000604801 525 ntBASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 RNVU1-19-201ENST00000613023 167 ntBASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 YWHAEP7-203ENST00000622054 312 ntBASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 PRNCR1-201ENST00000635449 12727 ntBASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 AL662795.2-201ENST00000624252 3706 ntBASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 OR5M2P-202ENST00000641241 4242 ntBASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
FOXR1Q6PIV2 CLCA3P-203ENST00000490028 2781 ntBASIC7.42□□□□□ -1.22
FOXR1Q6PIV2 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.42□□□□□ -1.22
FOXR1Q6PIV2 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
FOXR1Q6PIV2 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC7.42□□□□□ -1.22
FOXR1Q6PIV2 CR383658.2-201ENST00000547576 1525 ntBASIC7.42□□□□□ -1.22
FOXR1Q6PIV2 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.42□□□□□ -1.22
FOXR1Q6PIV2 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
FOXR1Q6PIV2 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.42□□□□□ -1.22
FOXR1Q6PIV2 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
FOXR1Q6PIV2 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
FOXR1Q6PIV2 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
FOXR1Q6PIV2 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
FOXR1Q6PIV2 AC092162.3-201ENST00000624511 1624 ntBASIC7.42□□□□□ -1.22
FOXR1Q6PIV2 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
FOXR1Q6PIV2 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms