Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC112487.2-201ENST00000637950 304 ntBASIC8.48□□□□□ -1.05
RC3H1Q5TC82 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 ZNF840P-201ENST00000504759 1996 ntBASIC8.48□□□□□ -1.05
RC3H1Q5TC82 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 RACGAP1P-201ENST00000550663 1879 ntBASIC8.47□□□□□ -1.05
RC3H1Q5TC82 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 Z99496.1-201ENST00000469424 1477 ntBASIC8.47□□□□□ -1.05
RC3H1Q5TC82 Y_RNA.295-201ENST00000364918 102 ntBASIC8.47□□□□□ -1.05
RC3H1Q5TC82 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 RN7SKP296-201ENST00000411185 341 ntBASIC8.47□□□□□ -1.05
RC3H1Q5TC82 RPS15AP38-201ENST00000413110 372 ntBASIC8.47□□□□□ -1.05
RC3H1Q5TC82 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 AL359092.1-201ENST00000417156 265 ntBASIC8.47□□□□□ -1.05
RC3H1Q5TC82 RPL21P111-201ENST00000418453 477 ntBASIC8.47□□□□□ -1.05
RC3H1Q5TC82 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 AC008072.1-201ENST00000434254 824 ntBASIC8.47□□□□□ -1.05
RC3H1Q5TC82 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 CYCSP42-201ENST00000450823 238 ntBASIC8.47□□□□□ -1.05
RC3H1Q5TC82 RPL21P134-201ENST00000453468 483 ntBASIC8.47□□□□□ -1.05
RC3H1Q5TC82 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 TRBV8-1-201ENST00000481590 279 ntBASIC8.47□□□□□ -1.05
RC3H1Q5TC82 HMGN1P12-201ENST00000499125 195 ntBASIC8.47□□□□□ -1.05
RC3H1Q5TC82 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 AC010342.1-201ENST00000514047 877 ntBASIC8.47□□□□□ -1.05
RC3H1Q5TC82 Y_RNA.675-201ENST00000516389 149 ntBASIC8.47□□□□□ -1.05
RC3H1Q5TC82 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 AL122125.1-201ENST00000616999 600 ntBASIC8.47□□□□□ -1.05
RC3H1Q5TC82 AP000577.1-201ENST00000624366 878 ntBASIC8.47□□□□□ -1.05
RC3H1Q5TC82 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 AL034408.1-201ENST00000637712 664 ntBASIC8.47□□□□□ -1.05
RC3H1Q5TC82 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
RC3H1Q5TC82 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
RC3H1Q5TC82 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
RC3H1Q5TC82 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
RC3H1Q5TC82 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC8.46□□□□□ -1.05
RC3H1Q5TC82 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
RC3H1Q5TC82 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
RC3H1Q5TC82 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.05
RC3H1Q5TC82 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
RC3H1Q5TC82 XRCC6P5-201ENST00000435236 1795 ntBASIC8.46□□□□□ -1.05
RC3H1Q5TC82 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC8.46□□□□□ -1.05
RC3H1Q5TC82 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
RC3H1Q5TC82 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
RC3H1Q5TC82 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
RC3H1Q5TC82 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
RC3H1Q5TC82 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
RC3H1Q5TC82 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
RC3H1Q5TC82 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC8.46□□□□□ -1.06
RC3H1Q5TC82 RN7SKP78-201ENST00000364711 318 ntBASIC8.46□□□□□ -1.06
RC3H1Q5TC82 Y_RNA.356-201ENST00000365475 113 ntBASIC8.46□□□□□ -1.06
RC3H1Q5TC82 LCN1P2-201ENST00000372030 223 ntBASIC8.46□□□□□ -1.06
RC3H1Q5TC82 RNU6-253P-201ENST00000384730 105 ntBASIC8.46□□□□□ -1.06
RC3H1Q5TC82 AC004386.1-201ENST00000393214 761 ntBASIC8.46□□□□□ -1.06
RC3H1Q5TC82 PRELID1P2-201ENST00000407805 396 ntBASIC8.46□□□□□ -1.06
RC3H1Q5TC82 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC8.46□□□□□ -1.06
RC3H1Q5TC82 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC8.46□□□□□ -1.06
RC3H1Q5TC82 PNKDP1-201ENST00000435914 430 ntBASIC8.46□□□□□ -1.06
RC3H1Q5TC82 AC104850.1-201ENST00000435940 476 ntBASIC8.46□□□□□ -1.06
RC3H1Q5TC82 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC8.46□□□□□ -1.06
RC3H1Q5TC82 OR52I1-201ENST00000450052 1050 ntBASIC8.46□□□□□ -1.06
RC3H1Q5TC82 RPL7L1P3-201ENST00000455249 689 ntBASIC8.46□□□□□ -1.06
RC3H1Q5TC82 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC8.46□□□□□ -1.06
RC3H1Q5TC82 RPS4XP23-201ENST00000487801 237 ntBASIC8.46□□□□□ -1.06
RC3H1Q5TC82 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC8.46□□□□□ -1.06
RC3H1Q5TC82 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC8.46□□□□□ -1.06
RC3H1Q5TC82 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC8.46□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms