Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CDH6P55285 CASC19-255ENST00000641733 1385 ntBASIC5.46□□□□□ -1.54
CDH6P55285 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CDH6P55285 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
CDH6P55285 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDH6P55285 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDH6P55285 AC005294.1-201ENST00000355509 281 ntBASIC5.46□□□□□ -1.54
CDH6P55285 AC007618.1-201ENST00000366455 732 ntBASIC5.46□□□□□ -1.54
CDH6P55285 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDH6P55285 RNA5SP187-201ENST00000384400 119 ntBASIC5.46□□□□□ -1.54
CDH6P55285 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CDH6P55285 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CDH6P55285 U3.25-201ENST00000391209 220 ntBASIC5.46□□□□□ -1.54
CDH6P55285 EI24P3-201ENST00000399046 1062 ntBASIC5.46□□□□□ -1.54
CDH6P55285 FAM96AP1-201ENST00000430879 482 ntBASIC5.46□□□□□ -1.54
CDH6P55285 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.46□□□□□ -1.54
CDH6P55285 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDH6P55285 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.46□□□□□ -1.54
CDH6P55285 PRPF38AP1-201ENST00000451976 933 ntBASIC5.46□□□□□ -1.54
CDH6P55285 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH6P55285 RN7SL189P-201ENST00000468631 289 ntBASIC5.46□□□□□ -1.54
CDH6P55285 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.46□□□□□ -1.54
CDH6P55285 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CDH6P55285 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.46□□□□□ -1.54
CDH6P55285 AC126177.5-201ENST00000549599 178 ntBASIC5.46□□□□□ -1.54
CDH6P55285 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.46□□□□□ -1.54
CDH6P55285 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.46□□□□□ -1.54
CDH6P55285 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDH6P55285 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.46□□□□□ -1.54
CDH6P55285 AC106730.2-201ENST00000566641 540 ntBASIC5.46□□□□□ -1.54
CDH6P55285 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.46□□□□□ -1.54
CDH6P55285 AC092944.2-201ENST00000605443 889 ntBASIC5.46□□□□□ -1.54
CDH6P55285 OR51C1P-201ENST00000608504 942 ntBASIC5.46□□□□□ -1.54
CDH6P55285 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDH6P55285 MIR6837-201ENST00000620884 64 ntBASIC5.46□□□□□ -1.54
CDH6P55285 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH6P55285 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.46□□□□□ -1.54
CDH6P55285 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH6P55285 OR55B1P-203ENST00000641518 2602 ntBASIC5.46□□□□□ -1.54
CDH6P55285 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDH6P55285 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CDH6P55285 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDH6P55285 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDH6P55285 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.46□□□□□ -1.54
CDH6P55285 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH6P55285 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDH6P55285 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDH6P55285 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDH6P55285 MAPK10-328ENST00000641553 4009 ntBASIC5.45□□□□□ -1.54
CDH6P55285 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDH6P55285 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDH6P55285 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDH6P55285 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDH6P55285 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.45□□□□□ -1.54
CDH6P55285 SMG1P7-201ENST00000565246 2704 ntBASIC5.45□□□□□ -1.54
CDH6P55285 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDH6P55285 MRRFP1-201ENST00000435941 1675 ntBASIC5.45□□□□□ -1.54
CDH6P55285 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CDH6P55285 RN7SKP160-201ENST00000363804 340 ntBASIC5.45□□□□□ -1.54
CDH6P55285 RNU1-146P-201ENST00000364015 165 ntBASIC5.45□□□□□ -1.54
CDH6P55285 RNA5SP223-201ENST00000365174 120 ntBASIC5.45□□□□□ -1.54
CDH6P55285 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDH6P55285 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CDH6P55285 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.45□□□□□ -1.54
CDH6P55285 GAPDHP58-201ENST00000438477 1006 ntBASIC5.45□□□□□ -1.54
CDH6P55285 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.45□□□□□ -1.54
CDH6P55285 RPS26P41-201ENST00000450370 284 ntBASIC5.45□□□□□ -1.54
CDH6P55285 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.45□□□□□ -1.54
CDH6P55285 SIAH1P1-201ENST00000479411 923 ntBASIC5.45□□□□□ -1.54
CDH6P55285 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDH6P55285 AL049874.2-201ENST00000492636 288 ntBASIC5.45□□□□□ -1.54
CDH6P55285 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.45□□□□□ -1.54
CDH6P55285 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.45□□□□□ -1.54
CDH6P55285 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.45□□□□□ -1.54
CDH6P55285 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CDH6P55285 AC022884.2-201ENST00000578535 580 ntBASIC5.45□□□□□ -1.54
CDH6P55285 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.45□□□□□ -1.54
CDH6P55285 AC008814.1-201ENST00000603797 406 ntBASIC5.45□□□□□ -1.54
CDH6P55285 RNU6-84P-201ENST00000607737 102 ntBASIC5.45□□□□□ -1.54
CDH6P55285 MIR6768-201ENST00000610734 72 ntBASIC5.45□□□□□ -1.54
CDH6P55285 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.45□□□□□ -1.54
CDH6P55285 CYP4F35P-202ENST00000636121 390 ntBASIC5.45□□□□□ -1.54
CDH6P55285 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.45□□□□□ -1.54
CDH6P55285 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.45□□□□□ -1.54
CDH6P55285 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CDH6P55285 AL031595.2-201ENST00000624215 19071 ntBASIC5.45□□□□□ -1.54
CDH6P55285 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDH6P55285 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CDH6P55285 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CDH6P55285 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDH6P55285 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CDH6P55285 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CDH6P55285 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.44□□□□□ -1.54
CDH6P55285 AP000473.2-201ENST00000602659 1537 ntBASIC5.44□□□□□ -1.54
CDH6P55285 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.44□□□□□ -1.54
CDH6P55285 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.44□□□□□ -1.54
CDH6P55285 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
CDH6P55285 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH6P55285 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.44□□□□□ -1.54
CDH6P55285 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms