Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC095055.1-201ENST00000603472 1113 ntBASIC5.44□□□□□ -1.54
CDH4P55283 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH4P55283 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.44□□□□□ -1.54
CDH4P55283 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH4P55283 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH4P55283 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH4P55283 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH4P55283 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH4P55283 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDH4P55283 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH4P55283 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
CDH4P55283 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CDH4P55283 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH4P55283 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH4P55283 AC092747.4-201ENST00000620519 1861 ntBASIC5.43□□□□□ -1.54
CDH4P55283 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH4P55283 GVINP1-202ENST00000531871 7271 ntBASIC5.43□□□□□ -1.54
CDH4P55283 ZNF733P-202ENST00000444809 1573 ntBASIC5.43□□□□□ -1.54
CDH4P55283 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CDH4P55283 RN7SKP153-201ENST00000365026 316 ntBASIC5.43□□□□□ -1.54
CDH4P55283 RNU1-43P-201ENST00000365052 165 ntBASIC5.43□□□□□ -1.54
CDH4P55283 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDH4P55283 AC005522.1-201ENST00000395416 346 ntBASIC5.43□□□□□ -1.54
CDH4P55283 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH4P55283 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH4P55283 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH4P55283 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH4P55283 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH4P55283 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH4P55283 DNAJB5P1-201ENST00000454004 806 ntBASIC5.43□□□□□ -1.54
CDH4P55283 Z92846.1-201ENST00000456203 268 ntBASIC5.43□□□□□ -1.54
CDH4P55283 CBX1P5-201ENST00000475330 559 ntBASIC5.43□□□□□ -1.54
CDH4P55283 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDH4P55283 AC006499.3-201ENST00000506077 748 ntBASIC5.43□□□□□ -1.54
CDH4P55283 RNA5SP92-201ENST00000516437 110 ntBASIC5.43□□□□□ -1.54
CDH4P55283 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH4P55283 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.43□□□□□ -1.54
CDH4P55283 AC127381.1-201ENST00000555979 939 ntBASIC5.43□□□□□ -1.54
CDH4P55283 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH4P55283 OR7E18P-201ENST00000592589 702 ntBASIC5.43□□□□□ -1.54
CDH4P55283 AC087468.1-201ENST00000604365 630 ntBASIC5.43□□□□□ -1.54
CDH4P55283 AC009597.2-201ENST00000604659 592 ntBASIC5.43□□□□□ -1.54
CDH4P55283 AP002505.2-201ENST00000623585 696 ntBASIC5.43□□□□□ -1.54
CDH4P55283 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH4P55283 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDH4P55283 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH4P55283 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CDH4P55283 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
CDH4P55283 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
CDH4P55283 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDH4P55283 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDH4P55283 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH4P55283 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH4P55283 SAMM50P1-201ENST00000455403 1399 ntBASIC5.42□□□□□ -1.54
CDH4P55283 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.42□□□□□ -1.54
CDH4P55283 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.42□□□□□ -1.54
CDH4P55283 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH4P55283 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH4P55283 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH4P55283 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH4P55283 DDX18P6-201ENST00000450119 1997 ntBASIC5.42□□□□□ -1.54
CDH4P55283 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.42□□□□□ -1.54
CDH4P55283 RNU6-167P-201ENST00000384292 106 ntBASIC5.42□□□□□ -1.54
CDH4P55283 DUTP5-201ENST00000406790 469 ntBASIC5.42□□□□□ -1.54
CDH4P55283 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.42□□□□□ -1.54
CDH4P55283 NPM1P18-201ENST00000434232 732 ntBASIC5.42□□□□□ -1.54
CDH4P55283 MED28P3-201ENST00000444288 531 ntBASIC5.42□□□□□ -1.54
CDH4P55283 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.42□□□□□ -1.54
CDH4P55283 AL389915.2-201ENST00000454576 441 ntBASIC5.42□□□□□ -1.54
CDH4P55283 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH4P55283 RN7SL799P-201ENST00000475891 298 ntBASIC5.42□□□□□ -1.54
CDH4P55283 RN7SL222P-201ENST00000476452 299 ntBASIC5.42□□□□□ -1.54
CDH4P55283 RN7SL727P-201ENST00000482164 296 ntBASIC5.42□□□□□ -1.54
CDH4P55283 GTF2F2P1-201ENST00000511083 675 ntBASIC5.42□□□□□ -1.54
CDH4P55283 AC024940.3-201ENST00000538551 316 ntBASIC5.42□□□□□ -1.54
CDH4P55283 AL162431.4-201ENST00000604674 411 ntBASIC5.42□□□□□ -1.54
CDH4P55283 OR51C1P-201ENST00000608504 942 ntBASIC5.42□□□□□ -1.54
CDH4P55283 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.42□□□□□ -1.54
CDH4P55283 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH4P55283 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.42□□□□□ -1.54
CDH4P55283 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.42□□□□□ -1.54
CDH4P55283 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH4P55283 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH4P55283 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.42□□□□□ -1.54
CDH4P55283 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH4P55283 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH4P55283 AC007342.5-201ENST00000571340 2142 ntBASIC5.42□□□□□ -1.54
CDH4P55283 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
CDH4P55283 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CDH4P55283 AP005432.1-201ENST00000580891 3485 ntBASIC5.42□□□□□ -1.54
CDH4P55283 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH4P55283 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.42□□□□□ -1.54
CDH4P55283 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH4P55283 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH4P55283 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.41□□□□□ -1.54
CDH4P55283 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDH4P55283 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDH4P55283 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH4P55283 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
CDH4P55283 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms