Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC105254.2-201ENST00000603636 436 ntBASIC6□□□□□ -1.45
HMGCS2P54868 AL139124.1-201ENST00000609123 421 ntBASIC6□□□□□ -1.45
HMGCS2P54868 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6□□□□□ -1.45
HMGCS2P54868 AL161616.1-201ENST00000611867 286 ntBASIC6□□□□□ -1.45
HMGCS2P54868 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6□□□□□ -1.45
HMGCS2P54868 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HMGCS2P54868 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6□□□□□ -1.45
HMGCS2P54868 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6□□□□□ -1.45
HMGCS2P54868 AC010435.1-201ENST00000623353 1177 ntBASIC6□□□□□ -1.45
HMGCS2P54868 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6□□□□□ -1.45
HMGCS2P54868 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HMGCS2P54868 XKRY2-202ENST00000623874 1581 ntBASIC6□□□□□ -1.45
HMGCS2P54868 XKRY-202ENST00000624960 1581 ntBASIC6□□□□□ -1.45
HMGCS2P54868 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
HMGCS2P54868 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
HMGCS2P54868 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6□□□□□ -1.45
HMGCS2P54868 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HMGCS2P54868 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6□□□□□ -1.45
HMGCS2P54868 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HMGCS2P54868 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6□□□□□ -1.45
HMGCS2P54868 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGCS2P54868 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
HMGCS2P54868 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.99□□□□□ -1.45
HMGCS2P54868 AC083899.1-201ENST00000454465 3819 ntBASIC5.99□□□□□ -1.45
HMGCS2P54868 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.99□□□□□ -1.45
HMGCS2P54868 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGCS2P54868 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGCS2P54868 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGCS2P54868 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGCS2P54868 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGCS2P54868 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.99□□□□□ -1.45
HMGCS2P54868 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGCS2P54868 AC092681.1-201ENST00000297369 291 ntBASIC5.99□□□□□ -1.45
HMGCS2P54868 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGCS2P54868 AP002530.1-201ENST00000405705 684 ntBASIC5.99□□□□□ -1.45
HMGCS2P54868 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.99□□□□□ -1.45
HMGCS2P54868 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.99□□□□□ -1.45
HMGCS2P54868 HSPD1P12-201ENST00000429127 1069 ntBASIC5.99□□□□□ -1.45
HMGCS2P54868 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.99□□□□□ -1.45
HMGCS2P54868 NDUFB4P8-201ENST00000435351 367 ntBASIC5.99□□□□□ -1.45
HMGCS2P54868 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.99□□□□□ -1.45
HMGCS2P54868 AC011753.3-201ENST00000443436 406 ntBASIC5.99□□□□□ -1.45
HMGCS2P54868 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.99□□□□□ -1.45
HMGCS2P54868 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.99□□□□□ -1.45
HMGCS2P54868 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.99□□□□□ -1.45
HMGCS2P54868 HMGN1P9-201ENST00000515212 298 ntBASIC5.99□□□□□ -1.45
HMGCS2P54868 AC079064.1-201ENST00000528365 362 ntBASIC5.99□□□□□ -1.45
HMGCS2P54868 GCSHP4-201ENST00000538792 439 ntBASIC5.99□□□□□ -1.45
HMGCS2P54868 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.99□□□□□ -1.45
HMGCS2P54868 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.99□□□□□ -1.45
HMGCS2P54868 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.99□□□□□ -1.45
HMGCS2P54868 MIR4270-201ENST00000581799 70 ntBASIC5.99□□□□□ -1.45
HMGCS2P54868 MIR4737-201ENST00000583979 81 ntBASIC5.99□□□□□ -1.45
HMGCS2P54868 AC108738.1-201ENST00000603703 237 ntBASIC5.99□□□□□ -1.45
HMGCS2P54868 AL034374.2-201ENST00000605281 548 ntBASIC5.99□□□□□ -1.45
HMGCS2P54868 AC015712.7-201ENST00000615211 635 ntBASIC5.99□□□□□ -1.45
HMGCS2P54868 MIR7703-201ENST00000620784 77 ntBASIC5.99□□□□□ -1.45
HMGCS2P54868 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.99□□□□□ -1.45
HMGCS2P54868 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGCS2P54868 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.99□□□□□ -1.45
HMGCS2P54868 AC079298.1-201ENST00000625026 1619 ntBASIC5.99□□□□□ -1.45
HMGCS2P54868 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HMGCS2P54868 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
HMGCS2P54868 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HMGCS2P54868 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGCS2P54868 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.99□□□□□ -1.45
HMGCS2P54868 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HMGCS2P54868 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HMGCS2P54868 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGCS2P54868 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGCS2P54868 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HMGCS2P54868 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGCS2P54868 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGCS2P54868 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.98□□□□□ -1.45
HMGCS2P54868 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HMGCS2P54868 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
HMGCS2P54868 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.98□□□□□ -1.45
HMGCS2P54868 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
HMGCS2P54868 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
HMGCS2P54868 AC010132.2-201ENST00000295493 1043 ntBASIC5.98□□□□□ -1.45
HMGCS2P54868 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
HMGCS2P54868 SNORA66-201ENST00000384792 133 ntBASIC5.98□□□□□ -1.45
HMGCS2P54868 FABP12P1-201ENST00000401911 322 ntBASIC5.98□□□□□ -1.45
HMGCS2P54868 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.98□□□□□ -1.45
HMGCS2P54868 AC019050.1-201ENST00000418508 492 ntBASIC5.98□□□□□ -1.45
HMGCS2P54868 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.98□□□□□ -1.45
HMGCS2P54868 BX679664.2-201ENST00000439282 283 ntBASIC5.98□□□□□ -1.45
HMGCS2P54868 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.98□□□□□ -1.45
HMGCS2P54868 RPL21P133-201ENST00000443666 476 ntBASIC5.98□□□□□ -1.45
HMGCS2P54868 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.98□□□□□ -1.45
HMGCS2P54868 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.98□□□□□ -1.45
HMGCS2P54868 AC063943.1-201ENST00000465434 453 ntBASIC5.98□□□□□ -1.45
HMGCS2P54868 RNA5SP43-201ENST00000516559 110 ntBASIC5.98□□□□□ -1.45
HMGCS2P54868 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.98□□□□□ -1.45
HMGCS2P54868 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HMGCS2P54868 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.98□□□□□ -1.45
HMGCS2P54868 AC018552.1-201ENST00000562099 811 ntBASIC5.98□□□□□ -1.45
HMGCS2P54868 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.98□□□□□ -1.45
HMGCS2P54868 ADAM3B-201ENST00000569937 840 ntBASIC5.98□□□□□ -1.45
HMGCS2P54868 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms