Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CNGA1P29973 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.83□□□□□ -1.32
CNGA1P29973 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.83□□□□□ -1.32
CNGA1P29973 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
CNGA1P29973 GAPDHP24-201ENST00000328713 983 ntBASIC6.83□□□□□ -1.32
CNGA1P29973 RN7SKP128-201ENST00000364270 303 ntBASIC6.83□□□□□ -1.32
CNGA1P29973 RNA5SP132-201ENST00000364725 118 ntBASIC6.83□□□□□ -1.32
CNGA1P29973 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
CNGA1P29973 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
CNGA1P29973 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
CNGA1P29973 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
CNGA1P29973 RNU6-298P-201ENST00000390888 96 ntBASIC6.83□□□□□ -1.32
CNGA1P29973 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CNGA1P29973 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.83□□□□□ -1.32
CNGA1P29973 RPL35AP3-201ENST00000414680 288 ntBASIC6.83□□□□□ -1.32
CNGA1P29973 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC6.83□□□□□ -1.32
CNGA1P29973 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.83□□□□□ -1.32
CNGA1P29973 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC6.83□□□□□ -1.32
CNGA1P29973 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.83□□□□□ -1.32
CNGA1P29973 AL627308.1-201ENST00000435693 821 ntBASIC6.83□□□□□ -1.32
CNGA1P29973 AL022237.1-201ENST00000446663 358 ntBASIC6.83□□□□□ -1.32
CNGA1P29973 SIAH1P1-201ENST00000479411 923 ntBASIC6.83□□□□□ -1.32
CNGA1P29973 AC114728.1-201ENST00000488289 483 ntBASIC6.83□□□□□ -1.32
CNGA1P29973 AC083795.1-201ENST00000491760 320 ntBASIC6.83□□□□□ -1.32
CNGA1P29973 DUTP7-201ENST00000507982 486 ntBASIC6.83□□□□□ -1.32
CNGA1P29973 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.83□□□□□ -1.32
CNGA1P29973 RN7SKP67-201ENST00000515905 235 ntBASIC6.83□□□□□ -1.32
CNGA1P29973 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.83□□□□□ -1.32
CNGA1P29973 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC6.83□□□□□ -1.32
CNGA1P29973 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.83□□□□□ -1.32
CNGA1P29973 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.83□□□□□ -1.32
CNGA1P29973 AL049830.4-201ENST00000555149 351 ntBASIC6.83□□□□□ -1.32
CNGA1P29973 AL356801.1-201ENST00000559320 294 ntBASIC6.83□□□□□ -1.32
CNGA1P29973 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.83□□□□□ -1.32
CNGA1P29973 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC6.83□□□□□ -1.32
CNGA1P29973 AC027229.1-201ENST00000583887 253 ntBASIC6.83□□□□□ -1.32
CNGA1P29973 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.83□□□□□ -1.32
CNGA1P29973 AC079610.2-201ENST00000604818 690 ntBASIC6.83□□□□□ -1.32
CNGA1P29973 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC6.83□□□□□ -1.32
CNGA1P29973 AC004948.1-201ENST00000609858 672 ntBASIC6.83□□□□□ -1.32
CNGA1P29973 CYCSP41-201ENST00000616920 296 ntBASIC6.83□□□□□ -1.32
CNGA1P29973 AL669942.2-201ENST00000620352 697 ntBASIC6.83□□□□□ -1.32
CNGA1P29973 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.83□□□□□ -1.32
CNGA1P29973 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC6.83□□□□□ -1.32
CNGA1P29973 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CNGA1P29973 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CNGA1P29973 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
CNGA1P29973 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CNGA1P29973 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CNGA1P29973 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CNGA1P29973 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.83□□□□□ -1.32
CNGA1P29973 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.83□□□□□ -1.32
CNGA1P29973 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CNGA1P29973 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.83□□□□□ -1.32
CNGA1P29973 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CNGA1P29973 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.82□□□□□ -1.32
CNGA1P29973 ZNF733P-202ENST00000444809 1573 ntBASIC6.82□□□□□ -1.32
CNGA1P29973 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
CNGA1P29973 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
CNGA1P29973 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
CNGA1P29973 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CNGA1P29973 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CNGA1P29973 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CNGA1P29973 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CNGA1P29973 AL121950.1-201ENST00000624993 2077 ntBASIC6.82□□□□□ -1.32
CNGA1P29973 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.82□□□□□ -1.32
CNGA1P29973 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CNGA1P29973 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
CNGA1P29973 SNORD8-201ENST00000363915 110 ntBASIC6.82□□□□□ -1.32
CNGA1P29973 RNA5SP251-201ENST00000410614 137 ntBASIC6.82□□□□□ -1.32
CNGA1P29973 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.82□□□□□ -1.32
CNGA1P29973 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.82□□□□□ -1.32
CNGA1P29973 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.82□□□□□ -1.32
CNGA1P29973 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.82□□□□□ -1.32
CNGA1P29973 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC6.82□□□□□ -1.32
CNGA1P29973 RPS27AP3-201ENST00000453803 454 ntBASIC6.82□□□□□ -1.32
CNGA1P29973 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CNGA1P29973 AC074087.1-201ENST00000512059 724 ntBASIC6.82□□□□□ -1.32
CNGA1P29973 RNA5SP34-201ENST00000516887 130 ntBASIC6.82□□□□□ -1.32
CNGA1P29973 RNA5SP400-201ENST00000517155 111 ntBASIC6.82□□□□□ -1.32
CNGA1P29973 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.82□□□□□ -1.32
CNGA1P29973 RPA2P3-201ENST00000533268 770 ntBASIC6.82□□□□□ -1.32
CNGA1P29973 AP003717.3-201ENST00000544832 1180 ntBASIC6.82□□□□□ -1.32
CNGA1P29973 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC6.82□□□□□ -1.32
CNGA1P29973 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.82□□□□□ -1.32
CNGA1P29973 AC012254.4-201ENST00000588843 273 ntBASIC6.82□□□□□ -1.32
CNGA1P29973 AC015802.2-201ENST00000589690 189 ntBASIC6.82□□□□□ -1.32
CNGA1P29973 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CNGA1P29973 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.82□□□□□ -1.32
CNGA1P29973 AC141002.1-201ENST00000607025 279 ntBASIC6.82□□□□□ -1.32
CNGA1P29973 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CNGA1P29973 AP004607.9-201ENST00000618202 316 ntBASIC6.82□□□□□ -1.32
CNGA1P29973 AP000770.2-201ENST00000623694 100 ntBASIC6.82□□□□□ -1.32
CNGA1P29973 AC068787.1-201ENST00000623908 691 ntBASIC6.82□□□□□ -1.32
CNGA1P29973 AC083865.1-201ENST00000636634 831 ntBASIC6.82□□□□□ -1.32
CNGA1P29973 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
CNGA1P29973 PARP4P2-201ENST00000446672 3326 ntBASIC6.82□□□□□ -1.32
CNGA1P29973 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
CNGA1P29973 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CNGA1P29973 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms