Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL4A5P29400 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL4A5P29400 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL4A5P29400 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL4A5P29400 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.05□□□□□ -1.44
COL4A5P29400 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
COL4A5P29400 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.05□□□□□ -1.44
COL4A5P29400 RPEP3-201ENST00000425462 676 ntBASIC6.05□□□□□ -1.44
COL4A5P29400 TRIM60P9Y-201ENST00000438459 816 ntBASIC6.05□□□□□ -1.44
COL4A5P29400 TRIM60P11Y-201ENST00000445313 801 ntBASIC6.05□□□□□ -1.44
COL4A5P29400 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC6.05□□□□□ -1.44
COL4A5P29400 RN7SL443P-201ENST00000464331 290 ntBASIC6.05□□□□□ -1.44
COL4A5P29400 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC6.05□□□□□ -1.44
COL4A5P29400 AC098976.1-201ENST00000513014 541 ntBASIC6.05□□□□□ -1.44
COL4A5P29400 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC6.05□□□□□ -1.44
COL4A5P29400 SEPT10P1-201ENST00000517342 1162 ntBASIC6.05□□□□□ -1.44
COL4A5P29400 AC068831.4-201ENST00000556118 109 ntBASIC6.05□□□□□ -1.44
COL4A5P29400 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC6.05□□□□□ -1.44
COL4A5P29400 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC6.05□□□□□ -1.44
COL4A5P29400 RPL12P25-202ENST00000598100 674 ntBASIC6.05□□□□□ -1.44
COL4A5P29400 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL4A5P29400 AC006338.2-201ENST00000616864 791 ntBASIC6.05□□□□□ -1.44
COL4A5P29400 AC069542.2-201ENST00000624816 216 ntBASIC6.05□□□□□ -1.44
COL4A5P29400 IPO5-229ENST00000631030 192 ntTSL 5 BASIC6.05□□□□□ -1.44
COL4A5P29400 AL359955.1-201ENST00000455242 3275 ntBASIC6.05□□□□□ -1.44
COL4A5P29400 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL4A5P29400 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
COL4A5P29400 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.05□□□□□ -1.44
COL4A5P29400 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL4A5P29400 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.05□□□□□ -1.44
COL4A5P29400 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.05□□□□□ -1.44
COL4A5P29400 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
COL4A5P29400 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL4A5P29400 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL4A5P29400 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.05□□□□□ -1.44
COL4A5P29400 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
COL4A5P29400 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL4A5P29400 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL4A5P29400 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
COL4A5P29400 ATP5HP3-201ENST00000396994 486 ntBASIC6.04□□□□□ -1.44
COL4A5P29400 CYP4F29P-201ENST00000420685 446 ntBASIC6.04□□□□□ -1.44
COL4A5P29400 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC6.04□□□□□ -1.44
COL4A5P29400 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6.04□□□□□ -1.44
COL4A5P29400 AC000111.2-201ENST00000448200 210 ntBASIC6.04□□□□□ -1.44
COL4A5P29400 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC6.04□□□□□ -1.44
COL4A5P29400 RN7SL189P-201ENST00000468631 289 ntBASIC6.04□□□□□ -1.44
COL4A5P29400 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.04□□□□□ -1.44
COL4A5P29400 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL4A5P29400 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.04□□□□□ -1.44
COL4A5P29400 AC069366.1-201ENST00000583159 838 ntBASIC6.04□□□□□ -1.44
COL4A5P29400 AC011944.2-201ENST00000624440 683 ntBASIC6.04□□□□□ -1.44
COL4A5P29400 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
COL4A5P29400 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL4A5P29400 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL4A5P29400 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
COL4A5P29400 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.04□□□□□ -1.44
COL4A5P29400 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
COL4A5P29400 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC6.04□□□□□ -1.44
COL4A5P29400 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
COL4A5P29400 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL4A5P29400 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL4A5P29400 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.04□□□□□ -1.44
COL4A5P29400 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC6.04□□□□□ -1.44
COL4A5P29400 Z97832.1-201ENST00000402490 328 ntBASIC6.04□□□□□ -1.44
COL4A5P29400 AL021331.1-201ENST00000402817 582 ntBASIC6.04□□□□□ -1.44
COL4A5P29400 SNX10-203ENST00000409367 746 ntTSL 5 BASIC6.04□□□□□ -1.44
COL4A5P29400 RN7SKP27-201ENST00000410684 333 ntBASIC6.04□□□□□ -1.44
COL4A5P29400 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.04□□□□□ -1.44
COL4A5P29400 SLC25A18P1-201ENST00000449385 454 ntBASIC6.04□□□□□ -1.44
COL4A5P29400 AC005412.2-201ENST00000492004 341 ntBASIC6.04□□□□□ -1.44
COL4A5P29400 RNU2-30P-201ENST00000516209 141 ntBASIC6.04□□□□□ -1.44
COL4A5P29400 AC079064.1-201ENST00000528365 362 ntBASIC6.04□□□□□ -1.44
COL4A5P29400 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC6.04□□□□□ -1.44
COL4A5P29400 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.04□□□□□ -1.44
COL4A5P29400 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC6.04□□□□□ -1.44
COL4A5P29400 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.04□□□□□ -1.44
COL4A5P29400 CR381572.2-201ENST00000624852 397 ntBASIC6.04□□□□□ -1.44
COL4A5P29400 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL4A5P29400 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL4A5P29400 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL4A5P29400 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.03□□□□□ -1.44
COL4A5P29400 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC6.03□□□□□ -1.44
COL4A5P29400 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.03□□□□□ -1.44
COL4A5P29400 AL592148.3-201ENST00000608771 2646 ntBASIC6.03□□□□□ -1.44
COL4A5P29400 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC6.03□□□□□ -1.44
COL4A5P29400 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
COL4A5P29400 OR4K15-201ENST00000305051 1216 ntBASIC6.03□□□□□ -1.44
COL4A5P29400 HYALP1-201ENST00000417674 1279 ntBASIC6.03□□□□□ -1.44
COL4A5P29400 AC093824.1-201ENST00000508796 343 ntBASIC6.03□□□□□ -1.44
COL4A5P29400 OR8G5-201ENST00000524943 1041 ntBASIC6.03□□□□□ -1.44
COL4A5P29400 AL110118.1-201ENST00000553543 400 ntBASIC6.03□□□□□ -1.44
COL4A5P29400 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC6.03□□□□□ -1.44
COL4A5P29400 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
COL4A5P29400 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL4A5P29400 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
COL4A5P29400 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC6.03□□□□□ -1.44
COL4A5P29400 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
COL4A5P29400 KYNUP3-201ENST00000574386 1341 ntBASIC6.03□□□□□ -1.44
COL4A5P29400 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL4A5P29400 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms