Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC019185.1-201ENST00000442718 389 ntBASIC4.95□□□□□ -1.62
NCK1P16333 AL450996.1-201ENST00000445574 1202 ntBASIC4.95□□□□□ -1.62
NCK1P16333 AC093166.3-201ENST00000448785 303 ntBASIC4.95□□□□□ -1.62
NCK1P16333 NPM1P19-201ENST00000450070 712 ntBASIC4.95□□□□□ -1.62
NCK1P16333 AP006222.1-205ENST00000450734 457 ntBASIC4.95□□□□□ -1.62
NCK1P16333 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.95□□□□□ -1.62
NCK1P16333 AP000926.3-201ENST00000497201 299 ntBASIC4.95□□□□□ -1.62
NCK1P16333 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.95□□□□□ -1.62
NCK1P16333 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.95□□□□□ -1.62
NCK1P16333 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NCK1P16333 AC138207.8-204ENST00000579588 527 ntBASIC4.95□□□□□ -1.62
NCK1P16333 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.95□□□□□ -1.62
NCK1P16333 AP000648.2-201ENST00000624182 404 ntBASIC4.95□□□□□ -1.62
NCK1P16333 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.95□□□□□ -1.62
NCK1P16333 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.95□□□□□ -1.62
NCK1P16333 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NCK1P16333 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
NCK1P16333 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
NCK1P16333 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NCK1P16333 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
NCK1P16333 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.95□□□□□ -1.62
NCK1P16333 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NCK1P16333 RLIMP2-201ENST00000427891 1563 ntBASIC4.95□□□□□ -1.62
NCK1P16333 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.95□□□□□ -1.62
NCK1P16333 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
NCK1P16333 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
NCK1P16333 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.94□□□□□ -1.62
NCK1P16333 OR13C3-201ENST00000374781 1108 ntBASIC4.94□□□□□ -1.62
NCK1P16333 GAPDHP42-201ENST00000406848 981 ntBASIC4.94□□□□□ -1.62
NCK1P16333 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.94□□□□□ -1.62
NCK1P16333 AC066692.1-201ENST00000421721 457 ntBASIC4.94□□□□□ -1.62
NCK1P16333 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.94□□□□□ -1.62
NCK1P16333 GAPDHP58-201ENST00000438477 1006 ntBASIC4.94□□□□□ -1.62
NCK1P16333 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.94□□□□□ -1.62
NCK1P16333 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.94□□□□□ -1.62
NCK1P16333 GTF3AP5-201ENST00000442645 697 ntBASIC4.94□□□□□ -1.62
NCK1P16333 AL672138.1-201ENST00000450604 1015 ntBASIC4.94□□□□□ -1.62
NCK1P16333 BX842559.2-201ENST00000451418 605 ntBASIC4.94□□□□□ -1.62
NCK1P16333 HLA-DPA3-207ENST00000454398 229 ntBASIC4.94□□□□□ -1.62
NCK1P16333 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
NCK1P16333 RN7SL423P-201ENST00000486202 304 ntBASIC4.94□□□□□ -1.62
NCK1P16333 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.94□□□□□ -1.62
NCK1P16333 SNORD116-30-201ENST00000516468 85 ntBASIC4.94□□□□□ -1.62
NCK1P16333 RN7SKP99-201ENST00000517028 307 ntBASIC4.94□□□□□ -1.62
NCK1P16333 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC4.94□□□□□ -1.62
NCK1P16333 HNRNPRP2-201ENST00000528421 743 ntBASIC4.94□□□□□ -1.62
NCK1P16333 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.94□□□□□ -1.62
NCK1P16333 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.94□□□□□ -1.62
NCK1P16333 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NCK1P16333 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NCK1P16333 AC006512.2-201ENST00000543250 486 ntBASIC4.94□□□□□ -1.62
NCK1P16333 AL358913.1-201ENST00000554342 121 ntBASIC4.94□□□□□ -1.62
NCK1P16333 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.94□□□□□ -1.62
NCK1P16333 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.94□□□□□ -1.62
NCK1P16333 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.94□□□□□ -1.62
NCK1P16333 RN7SL708P-201ENST00000580952 299 ntBASIC4.94□□□□□ -1.62
NCK1P16333 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.94□□□□□ -1.62
NCK1P16333 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.94□□□□□ -1.62
NCK1P16333 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.94□□□□□ -1.62
NCK1P16333 AC073575.2-201ENST00000614212 627 ntBASIC4.94□□□□□ -1.62
NCK1P16333 Six3os1_2.1-201ENST00000616963 217 ntBASIC4.94□□□□□ -1.62
NCK1P16333 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
NCK1P16333 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.94□□□□□ -1.62
NCK1P16333 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.94□□□□□ -1.62
NCK1P16333 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NCK1P16333 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NCK1P16333 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.94□□□□□ -1.62
NCK1P16333 AC093849.1-201ENST00000563631 2209 ntBASIC4.94□□□□□ -1.62
NCK1P16333 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
NCK1P16333 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
NCK1P16333 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NCK1P16333 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NCK1P16333 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.93□□□□□ -1.62
NCK1P16333 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
NCK1P16333 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
NCK1P16333 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
NCK1P16333 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NCK1P16333 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NCK1P16333 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NCK1P16333 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.93□□□□□ -1.62
NCK1P16333 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.93□□□□□ -1.62
NCK1P16333 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
NCK1P16333 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
NCK1P16333 U3.32-201ENST00000408116 212 ntBASIC4.93□□□□□ -1.62
NCK1P16333 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.93□□□□□ -1.62
NCK1P16333 BX119321.1-201ENST00000428912 797 ntBASIC4.93□□□□□ -1.62
NCK1P16333 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.93□□□□□ -1.62
NCK1P16333 CLUHP1-201ENST00000435012 1190 ntBASIC4.93□□□□□ -1.62
NCK1P16333 AC110602.1-201ENST00000437414 318 ntBASIC4.93□□□□□ -1.62
NCK1P16333 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.93□□□□□ -1.62
NCK1P16333 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.93□□□□□ -1.62
NCK1P16333 AL359839.1-201ENST00000451975 1160 ntBASIC4.93□□□□□ -1.62
NCK1P16333 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.93□□□□□ -1.62
NCK1P16333 AC107015.1-201ENST00000466902 747 ntBASIC4.93□□□□□ -1.62
NCK1P16333 RN7SL189P-201ENST00000468631 289 ntBASIC4.93□□□□□ -1.62
NCK1P16333 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NCK1P16333 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.93□□□□□ -1.62
NCK1P16333 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.93□□□□□ -1.62
NCK1P16333 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.93□□□□□ -1.62
NCK1P16333 AC006499.4-201ENST00000510947 694 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms