Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 RNA5SP455-201ENST00000365190 119 ntBASIC4.85□□□□□ -1.63
SPTA1P02549 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.85□□□□□ -1.63
SPTA1P02549 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.85□□□□□ -1.63
SPTA1P02549 NDUFB4P12-201ENST00000513465 390 ntBASIC4.85□□□□□ -1.63
SPTA1P02549 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.85□□□□□ -1.63
SPTA1P02549 RN7SL690P-201ENST00000582087 240 ntBASIC4.85□□□□□ -1.63
SPTA1P02549 AC079414.3-201ENST00000612986 1090 ntBASIC4.85□□□□□ -1.63
SPTA1P02549 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SPTA1P02549 UGT2B27P-201ENST00000505092 1620 ntBASIC4.85□□□□□ -1.63
SPTA1P02549 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
SPTA1P02549 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SPTA1P02549 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SPTA1P02549 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SPTA1P02549 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SPTA1P02549 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
SPTA1P02549 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
SPTA1P02549 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
SPTA1P02549 CDY5P-201ENST00000411487 1580 ntBASIC4.84□□□□□ -1.63
SPTA1P02549 CDY9P-201ENST00000451397 1580 ntBASIC4.84□□□□□ -1.63
SPTA1P02549 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC4.84□□□□□ -1.63
SPTA1P02549 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SPTA1P02549 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SPTA1P02549 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SPTA1P02549 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SPTA1P02549 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SPTA1P02549 RNU1-64P-201ENST00000365443 163 ntBASIC4.84□□□□□ -1.63
SPTA1P02549 OR1L6-202ENST00000373684 1044 ntBASIC4.84□□□□□ -1.63
SPTA1P02549 AL359265.2-201ENST00000434367 631 ntBASIC4.84□□□□□ -1.63
SPTA1P02549 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.84□□□□□ -1.63
SPTA1P02549 RPL34P20-201ENST00000442771 351 ntBASIC4.84□□□□□ -1.63
SPTA1P02549 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.84□□□□□ -1.63
SPTA1P02549 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC4.84□□□□□ -1.63
SPTA1P02549 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.84□□□□□ -1.63
SPTA1P02549 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.84□□□□□ -1.63
SPTA1P02549 AC009643.1-201ENST00000532030 391 ntBASIC4.84□□□□□ -1.63
SPTA1P02549 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.84□□□□□ -1.63
SPTA1P02549 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.84□□□□□ -1.63
SPTA1P02549 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.84□□□□□ -1.63
SPTA1P02549 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.84□□□□□ -1.63
SPTA1P02549 MLECP1-201ENST00000615893 709 ntBASIC4.84□□□□□ -1.63
SPTA1P02549 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SPTA1P02549 AC005034.3-201ENST00000604845 1747 ntBASIC4.84□□□□□ -1.63
SPTA1P02549 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC4.84□□□□□ -1.63
SPTA1P02549 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SPTA1P02549 AC099654.2-201ENST00000433031 1980 ntBASIC4.84□□□□□ -1.63
SPTA1P02549 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SPTA1P02549 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SPTA1P02549 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SPTA1P02549 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SPTA1P02549 AL589993.1-201ENST00000407450 2524 ntBASIC4.84□□□□□ -1.64
SPTA1P02549 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.84□□□□□ -1.64
SPTA1P02549 AL513533.1-201ENST00000453728 415 ntBASIC4.84□□□□□ -1.64
SPTA1P02549 AC091167.1-201ENST00000492017 396 ntBASIC4.84□□□□□ -1.64
SPTA1P02549 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.84□□□□□ -1.64
SPTA1P02549 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC4.84□□□□□ -1.64
SPTA1P02549 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
SPTA1P02549 AC243756.2-201ENST00000618406 463 ntBASIC4.84□□□□□ -1.64
SPTA1P02549 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.84□□□□□ -1.64
SPTA1P02549 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.64
SPTA1P02549 DHX40P1-201ENST00000588725 1412 ntBASIC4.84□□□□□ -1.64
SPTA1P02549 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
SPTA1P02549 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SPTA1P02549 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SPTA1P02549 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SPTA1P02549 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SPTA1P02549 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.83□□□□□ -1.64
SPTA1P02549 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
SPTA1P02549 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SPTA1P02549 IRF5P1-201ENST00000504852 2164 ntBASIC4.83□□□□□ -1.64
SPTA1P02549 Y_RNA.333-201ENST00000365274 102 ntBASIC4.83□□□□□ -1.64
SPTA1P02549 CHIAP3-201ENST00000423668 1133 ntBASIC4.83□□□□□ -1.64
SPTA1P02549 Z95327.1-201ENST00000446082 482 ntBASIC4.83□□□□□ -1.64
SPTA1P02549 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SPTA1P02549 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.83□□□□□ -1.64
SPTA1P02549 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.83□□□□□ -1.64
SPTA1P02549 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SPTA1P02549 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.83□□□□□ -1.64
SPTA1P02549 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SPTA1P02549 YWHABP2-201ENST00000540201 713 ntBASIC4.83□□□□□ -1.64
SPTA1P02549 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.83□□□□□ -1.64
SPTA1P02549 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC4.83□□□□□ -1.64
SPTA1P02549 MIR8089-201ENST00000620165 82 ntBASIC4.83□□□□□ -1.64
SPTA1P02549 AC018816.2-201ENST00000621460 353 ntBASIC4.83□□□□□ -1.64
SPTA1P02549 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SPTA1P02549 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SPTA1P02549 AC017104.4-201ENST00000636283 1592 ntBASIC4.83□□□□□ -1.64
SPTA1P02549 AC139713.2-214ENST00000642059 1811 ntBASIC4.83□□□□□ -1.64
SPTA1P02549 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SPTA1P02549 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.83□□□□□ -1.64
SPTA1P02549 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SPTA1P02549 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC4.83□□□□□ -1.64
SPTA1P02549 SNORD46.1-201ENST00000364139 104 ntBASIC4.83□□□□□ -1.64
SPTA1P02549 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SPTA1P02549 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SPTA1P02549 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SPTA1P02549 OR4K12P-201ENST00000406538 961 ntBASIC4.83□□□□□ -1.64
SPTA1P02549 MIR1182-201ENST00000408363 97 ntBASIC4.83□□□□□ -1.64
SPTA1P02549 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SPTA1P02549 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.83□□□□□ -1.64
SPTA1P02549 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms