Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
USH2AO75445 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
USH2AO75445 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC2.21□□□□□ -2.05
USH2AO75445 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC2.21□□□□□ -2.05
USH2AO75445 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
USH2AO75445 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC2.21□□□□□ -2.05
USH2AO75445 GIGYF2-205ENST00000409547 5978 ntTSL 1 (best) BASIC2.21□□□□□ -2.05
USH2AO75445 CNTNAP2-201ENST00000361727 9896 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
USH2AO75445 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
USH2AO75445 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC2.21□□□□□ -2.05
USH2AO75445 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
USH2AO75445 NUDCD2-201ENST00000302764 8005 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
USH2AO75445 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
USH2AO75445 Y_RNA.500-201ENST00000384466 111 ntBASIC2.21□□□□□ -2.06
USH2AO75445 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
USH2AO75445 AL035246.1-201ENST00000433554 1255 ntBASIC2.21□□□□□ -2.06
USH2AO75445 RPS3AP54-201ENST00000435535 734 ntBASIC2.21□□□□□ -2.06
USH2AO75445 AC016831.4-201ENST00000438302 307 ntBASIC2.21□□□□□ -2.06
USH2AO75445 CYCSP32-201ENST00000440548 321 ntBASIC2.21□□□□□ -2.06
USH2AO75445 RRM2P4-201ENST00000441721 562 ntBASIC2.21□□□□□ -2.06
USH2AO75445 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC2.21□□□□□ -2.06
USH2AO75445 RPS27AP1-201ENST00000475545 471 ntBASIC2.21□□□□□ -2.06
USH2AO75445 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
USH2AO75445 AC108475.1-201ENST00000507880 950 ntBASIC2.21□□□□□ -2.06
USH2AO75445 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC2.21□□□□□ -2.06
USH2AO75445 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.21□□□□□ -2.06
USH2AO75445 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC2.21□□□□□ -2.06
USH2AO75445 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC2.21□□□□□ -2.06
USH2AO75445 AC011497.2-201ENST00000600255 639 ntBASIC2.21□□□□□ -2.06
USH2AO75445 AP000843.1-201ENST00000624880 701 ntBASIC2.21□□□□□ -2.06
USH2AO75445 USP47-202ENST00000339865 7775 ntTSL 2 BASIC2.21□□□□□ -2.06
USH2AO75445 AC004944.1-201ENST00000517807 3059 ntBASIC2.21□□□□□ -2.06
USH2AO75445 NCLP2-201ENST00000416078 1462 ntBASIC2.21□□□□□ -2.06
USH2AO75445 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC2.21□□□□□ -2.06
USH2AO75445 GTF2IP13-202ENST00000609439 10247 ntTSL 5 BASIC2.21□□□□□ -2.06
USH2AO75445 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC2.21□□□□□ -2.06
USH2AO75445 SLC38A1-201ENST00000398637 8066 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
USH2AO75445 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
USH2AO75445 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
USH2AO75445 AL132765.1-201ENST00000434165 553 ntBASIC2.21□□□□□ -2.06
USH2AO75445 AC073465.2-201ENST00000440938 498 ntBASIC2.21□□□□□ -2.06
USH2AO75445 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC2.21□□□□□ -2.06
USH2AO75445 TAAR4P-201ENST00000454843 1039 ntBASIC2.21□□□□□ -2.06
USH2AO75445 AC105129.1-201ENST00000560250 297 ntBASIC2.21□□□□□ -2.06
USH2AO75445 H3F3BP2-201ENST00000583907 357 ntBASIC2.21□□□□□ -2.06
USH2AO75445 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
USH2AO75445 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
USH2AO75445 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
USH2AO75445 THSD7A-202ENST00000423059 10663 ntAPPRIS P2 TSL 5 BASIC2.21□□□□□ -2.06
USH2AO75445 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC2.21□□□□□ -2.06
USH2AO75445 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
USH2AO75445 ZNHIT6-202ENST00000431532 6080 ntTSL 2 BASIC2.21□□□□□ -2.06
USH2AO75445 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC2.21□□□□□ -2.06
USH2AO75445 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC2.21□□□□□ -2.06
USH2AO75445 TACC2-212ENST00000453444 9158 ntTSL 5 BASIC2.21□□□□□ -2.06
USH2AO75445 ERG-203ENST00000398905 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
USH2AO75445 ERG-204ENST00000398907 4809 ntTSL 5 BASIC2.21□□□□□ -2.06
USH2AO75445 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
USH2AO75445 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
USH2AO75445 AC092111.2-201ENST00000611627 1414 ntBASIC2.21□□□□□ -2.06
USH2AO75445 VCPIP1-201ENST00000310421 9942 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
USH2AO75445 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
USH2AO75445 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC2.21□□□□□ -2.06
USH2AO75445 NAIP-208ENST00000517649 6124 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
USH2AO75445 RNU1-94P-201ENST00000362627 173 ntBASIC2.21□□□□□ -2.06
USH2AO75445 NPM1P36-201ENST00000415681 835 ntBASIC2.21□□□□□ -2.06
USH2AO75445 RNGTTP1-201ENST00000420965 728 ntBASIC2.21□□□□□ -2.06
USH2AO75445 OR10T1P-201ENST00000424327 947 ntBASIC2.21□□□□□ -2.06
USH2AO75445 NANOGP9-201ENST00000439890 892 ntBASIC2.21□□□□□ -2.06
USH2AO75445 AL162739.1-201ENST00000450606 307 ntBASIC2.21□□□□□ -2.06
USH2AO75445 IGHV5-78-201ENST00000450948 295 ntBASIC2.21□□□□□ -2.06
USH2AO75445 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC2.21□□□□□ -2.06
USH2AO75445 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC2.21□□□□□ -2.06
USH2AO75445 AC004069.2-201ENST00000505438 1114 ntBASIC2.21□□□□□ -2.06
USH2AO75445 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC2.21□□□□□ -2.06
USH2AO75445 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC2.21□□□□□ -2.06
USH2AO75445 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
USH2AO75445 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
USH2AO75445 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC2.21□□□□□ -2.06
USH2AO75445 AC233263.6-201ENST00000631132 1963 ntBASIC2.21□□□□□ -2.06
USH2AO75445 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
USH2AO75445 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
USH2AO75445 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC2.21□□□□□ -2.06
USH2AO75445 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.21□□□□□ -2.06
USH2AO75445 GTF2IP5-201ENST00000414608 731 ntBASIC2.21□□□□□ -2.06
USH2AO75445 TMX2P1-201ENST00000436507 708 ntBASIC2.21□□□□□ -2.06
USH2AO75445 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC2.21□□□□□ -2.06
USH2AO75445 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC2.21□□□□□ -2.06
USH2AO75445 AL356863.1-201ENST00000623378 1080 ntBASIC2.21□□□□□ -2.06
USH2AO75445 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
USH2AO75445 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
USH2AO75445 LRRC37BP1-203ENST00000417404 4742 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
USH2AO75445 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
USH2AO75445 ATP7B-201ENST00000242839 6638 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
USH2AO75445 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
USH2AO75445 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
USH2AO75445 JCAD-201ENST00000375377 9265 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
USH2AO75445 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
USH2AO75445 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
USH2AO75445 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms