Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 MIR1182-201ENST00000408363 97 ntBASIC8.98□□□□□ -0.97
CUX2O14529 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC8.98□□□□□ -0.97
CUX2O14529 BX510359.2-201ENST00000417920 305 ntBASIC8.98□□□□□ -0.97
CUX2O14529 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC8.98□□□□□ -0.97
CUX2O14529 RPL12P28-201ENST00000430852 489 ntBASIC8.98□□□□□ -0.97
CUX2O14529 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC8.98□□□□□ -0.97
CUX2O14529 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC8.98□□□□□ -0.97
CUX2O14529 AC093827.1-201ENST00000480094 861 ntBASIC8.98□□□□□ -0.97
CUX2O14529 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC8.98□□□□□ -0.97
CUX2O14529 AC137627.1-201ENST00000545761 289 ntBASIC8.98□□□□□ -0.97
CUX2O14529 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC8.98□□□□□ -0.97
CUX2O14529 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC8.98□□□□□ -0.97
CUX2O14529 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
CUX2O14529 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CUX2O14529 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC8.98□□□□□ -0.97
CUX2O14529 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
CUX2O14529 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC8.98□□□□□ -0.97
CUX2O14529 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CUX2O14529 AL627171.1-201ENST00000618845 1308 ntBASIC8.97□□□□□ -0.97
CUX2O14529 AC007114.2-201ENST00000576014 4281 ntBASIC8.97□□□□□ -0.97
CUX2O14529 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC8.97□□□□□ -0.97
CUX2O14529 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
CUX2O14529 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC8.97□□□□□ -0.97
CUX2O14529 SNORD46.1-201ENST00000364139 104 ntBASIC8.97□□□□□ -0.97
CUX2O14529 MIR600-201ENST00000385007 98 ntBASIC8.97□□□□□ -0.97
CUX2O14529 CYP2AC1P-201ENST00000407830 1173 ntBASIC8.97□□□□□ -0.97
CUX2O14529 USP24P1-201ENST00000433802 779 ntBASIC8.97□□□□□ -0.97
CUX2O14529 AC093840.1-201ENST00000511599 336 ntBASIC8.97□□□□□ -0.97
CUX2O14529 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC8.97□□□□□ -0.97
CUX2O14529 AC006427.1-201ENST00000514359 712 ntBASIC8.97□□□□□ -0.97
CUX2O14529 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC8.97□□□□□ -0.97
CUX2O14529 AP005119.2-201ENST00000579735 1105 ntBASIC8.97□□□□□ -0.97
CUX2O14529 SSX9-202ENST00000608568 580 ntTSL 4 BASIC8.97□□□□□ -0.97
CUX2O14529 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CUX2O14529 AC005725.1-201ENST00000577346 2607 ntBASIC8.97□□□□□ -0.97
CUX2O14529 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC8.97□□□□□ -0.97
CUX2O14529 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CUX2O14529 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC8.97□□□□□ -0.97
CUX2O14529 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CUX2O14529 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CUX2O14529 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CUX2O14529 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC8.97□□□□□ -0.97
CUX2O14529 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CUX2O14529 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CUX2O14529 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC8.97□□□□□ -0.97
CUX2O14529 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC8.96□□□□□ -0.97
CUX2O14529 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
CUX2O14529 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
CUX2O14529 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC8.96□□□□□ -0.97
CUX2O14529 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC8.96□□□□□ -0.97
CUX2O14529 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC8.96□□□□□ -0.97
CUX2O14529 HMGB3P7-201ENST00000400214 611 ntBASIC8.96□□□□□ -0.97
CUX2O14529 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC8.96□□□□□ -0.97
CUX2O14529 ATP5LP5-201ENST00000483050 299 ntBASIC8.96□□□□□ -0.97
CUX2O14529 RNA5SP43-201ENST00000516559 110 ntBASIC8.96□□□□□ -0.97
CUX2O14529 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC8.96□□□□□ -0.97
CUX2O14529 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC8.96□□□□□ -0.97
CUX2O14529 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC8.96□□□□□ -0.97
CUX2O14529 H3F3BP2-201ENST00000583907 357 ntBASIC8.96□□□□□ -0.97
CUX2O14529 AC005191.1-201ENST00000603950 358 ntBASIC8.96□□□□□ -0.97
CUX2O14529 ZYXP1-201ENST00000617638 118 ntBASIC8.96□□□□□ -0.97
CUX2O14529 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC8.96□□□□□ -0.97
CUX2O14529 AC063976.2-201ENST00000425667 3556 ntBASIC8.96□□□□□ -0.97
CUX2O14529 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
CUX2O14529 AL592148.3-201ENST00000608771 2646 ntBASIC8.96□□□□□ -0.98
CUX2O14529 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CUX2O14529 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC8.96□□□□□ -0.98
CUX2O14529 AL353796.1-201ENST00000561542 3241 ntBASIC8.96□□□□□ -0.98
CUX2O14529 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CUX2O14529 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC8.96□□□□□ -0.98
CUX2O14529 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CUX2O14529 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
CUX2O14529 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC8.96□□□□□ -0.98
CUX2O14529 TXNP5-201ENST00000441043 315 ntBASIC8.96□□□□□ -0.98
CUX2O14529 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC8.96□□□□□ -0.98
CUX2O14529 OR5AM1P-201ENST00000532136 1032 ntBASIC8.96□□□□□ -0.98
CUX2O14529 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC8.96□□□□□ -0.98
CUX2O14529 MIR3939-201ENST00000582614 106 ntBASIC8.96□□□□□ -0.98
CUX2O14529 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC8.96□□□□□ -0.98
CUX2O14529 AC098935.2-201ENST00000604222 466 ntBASIC8.96□□□□□ -0.98
CUX2O14529 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC8.96□□□□□ -0.98
CUX2O14529 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC8.95□□□□□ -0.98
CUX2O14529 ATP5A1P4-201ENST00000556888 1605 ntBASIC8.95□□□□□ -0.98
CUX2O14529 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CUX2O14529 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CUX2O14529 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
CUX2O14529 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC8.95□□□□□ -0.98
CUX2O14529 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
CUX2O14529 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC8.95□□□□□ -0.98
CUX2O14529 ATP5F1P3-201ENST00000397213 657 ntBASIC8.95□□□□□ -0.98
CUX2O14529 RNF10P1-201ENST00000418589 369 ntBASIC8.95□□□□□ -0.98
CUX2O14529 AL358176.3-201ENST00000420757 454 ntBASIC8.95□□□□□ -0.98
CUX2O14529 AL390879.1-201ENST00000439143 386 ntBASIC8.95□□□□□ -0.98
CUX2O14529 VN1R34P-201ENST00000447387 883 ntBASIC8.95□□□□□ -0.98
CUX2O14529 AC058823.1-201ENST00000485315 474 ntBASIC8.95□□□□□ -0.98
CUX2O14529 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC8.95□□□□□ -0.98
CUX2O14529 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
CUX2O14529 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC8.95□□□□□ -0.98
CUX2O14529 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
CUX2O14529 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms