Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RPL7P14-201ENST00000449851 741 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 CTSLP6-201ENST00000458273 1002 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AC079193.1-201ENST00000460497 588 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AC091180.1-201ENST00000462104 372 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 SNX18P25-201ENST00000510539 758 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 RN7SKP253-201ENST00000516424 309 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 IGKV2D-23-201ENST00000518179 286 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 LINC01024-206ENST00000522747 1044 ntTSL 3 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 FAU-203ENST00000525297 355 ntTSL 5 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AL133399.1-201ENST00000527476 298 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AP001994.1-201ENST00000527539 826 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 CBX3P5-201ENST00000552017 521 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AC026956.1-201ENST00000558741 396 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AC015674.1-201ENST00000578482 267 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 GMFG-212ENST00000602185 423 ntTSL 3 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AL161931.1-201ENST00000612768 246 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 FRG2MP-201ENST00000613317 856 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AC234782.5-201ENST00000617723 324 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AL645927.2-201ENST00000618350 349 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AP003108.4-201ENST00000623917 878 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 DRG1-207ENST00000629688 309 ntTSL 5 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AL451142.2-201ENST00000429076 2090 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 EIF3EP1-201ENST00000433978 1316 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AC016588.2-201ENST00000632484 3021 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 SNORD74.4-201ENST00000364129 80 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 RHOT1P2-201ENST00000366423 333 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AMD1P2-201ENST00000412936 992 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 RPS6P23-201ENST00000413224 722 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AC099336.2-201ENST00000422457 254 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 NAP1L4P2-201ENST00000425958 899 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 GTF3AP6-201ENST00000432585 986 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 RPS20P1-201ENST00000434853 354 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 SNX18P9-201ENST00000440580 835 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 TRIM60P16-201ENST00000444048 694 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 EIF4A1P11-201ENST00000451239 222 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 IFNWP4-201ENST00000453148 294 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AZGP1P2-201ENST00000454506 345 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AKR1D1P1-201ENST00000457236 936 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AC099560.2-201ENST00000457554 255 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 RPL12P31-201ENST00000478433 450 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 RN7SL282P-201ENST00000479676 297 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 RN7SL413P-201ENST00000482700 297 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AGGF1P3-201ENST00000493675 1213 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AC107956.2-201ENST00000496042 454 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 Vault.2-201ENST00000516519 98 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 CARSP2-201ENST00000520688 277 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 RPL10P19-203ENST00000522289 663 ntTSL 3 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AP001782.1-202ENST00000527774 445 ntTSL 3 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms