Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 RPL7AP61-201ENST00000443410 636 ntBASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 AC015864.1-201ENST00000496512 544 ntBASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 SNORA70.11-201ENST00000515987 138 ntBASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 SNORA70.13-201ENST00000516116 138 ntBASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 AC069307.1-201ENST00000602820 447 ntBASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 AL589674.2-201ENST00000604304 337 ntBASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 AC004477.3-201ENST00000614061 590 ntBASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 AL359513.1-201ENST00000614364 557 ntBASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 AC007204.2-201ENST00000615022 616 ntBASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 AC138965.3-201ENST00000623875 498 ntBASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 AC235565.1-201ENST00000456962 1325 ntBASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRAV27A0A087WT01 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 THAP12P5-201ENST00000405864 2275 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 SCARNA15-201ENST00000607520 4325 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 SNORA67-201ENST00000384423 137 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 RAB5CP1-201ENST00000395972 580 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 PEX12P1-201ENST00000400284 1048 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 AC009804.1-201ENST00000400949 179 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 RN7SKP293-201ENST00000411389 296 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 AC007738.1-201ENST00000413892 348 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 DPPA2P2-201ENST00000418220 897 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 AC013429.2-201ENST00000418798 781 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 AL139148.1-201ENST00000427122 680 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 SUMO2P8-201ENST00000434672 286 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 AC007386.1-201ENST00000455212 582 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 Z92846.1-201ENST00000456203 268 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 RPSAP39-201ENST00000467439 883 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 RPS4XP20-201ENST00000505751 772 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 GTF2F2P1-201ENST00000511083 675 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 AC127381.1-201ENST00000555979 939 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 AC009852.2-201ENST00000567898 485 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 AC020978.7-201ENST00000575953 1187 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 AC016839.1-201ENST00000578162 867 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 SNORD95-201ENST00000579879 68 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 AC011840.5-201ENST00000582125 771 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 WBP1LP8-201ENST00000617401 327 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 AC241377.1-201ENST00000619797 406 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 BX005214.3-202ENST00000619809 325 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 AL357153.4-201ENST00000620487 1016 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 AC136428.4-201ENST00000634254 1155 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 AC135068.12-201ENST00000637370 931 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
TRAV27A0A087WT01 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 AC083843.2-201ENST00000568248 6253 ntBASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRAV27A0A087WT01 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 160.6 ms