Protein–RNA interactions for Protein: Q9Y661

HS3ST4, Heparan sulfate glucosamine 3-O-sulfotransferase 4, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST4Q9Y661 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HS3ST4Q9Y661 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HS3ST4Q9Y661 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
HS3ST4Q9Y661 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HS3ST4Q9Y661 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HS3ST4Q9Y661 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HS3ST4Q9Y661 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HS3ST4Q9Y661 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HS3ST4Q9Y661 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HS3ST4Q9Y661 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.21■□□□□ 0.83
HS3ST4Q9Y661 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HS3ST4Q9Y661 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HS3ST4Q9Y661 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HS3ST4Q9Y661 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.2■□□□□ 0.82
HS3ST4Q9Y661 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.2■□□□□ 0.82
HS3ST4Q9Y661 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
HS3ST4Q9Y661 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
HS3ST4Q9Y661 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HS3ST4Q9Y661 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
HS3ST4Q9Y661 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HS3ST4Q9Y661 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.2■□□□□ 0.82
HS3ST4Q9Y661 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.2■□□□□ 0.82
HS3ST4Q9Y661 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.2■□□□□ 0.82
HS3ST4Q9Y661 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.2■□□□□ 0.82
HS3ST4Q9Y661 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.2■□□□□ 0.82
HS3ST4Q9Y661 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.2■□□□□ 0.82
HS3ST4Q9Y661 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HS3ST4Q9Y661 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HS3ST4Q9Y661 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.2■□□□□ 0.82
HS3ST4Q9Y661 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.2■□□□□ 0.82
HS3ST4Q9Y661 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HS3ST4Q9Y661 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HS3ST4Q9Y661 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
HS3ST4Q9Y661 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HS3ST4Q9Y661 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HS3ST4Q9Y661 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HS3ST4Q9Y661 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.19■□□□□ 0.82
HS3ST4Q9Y661 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HS3ST4Q9Y661 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HS3ST4Q9Y661 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HS3ST4Q9Y661 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HS3ST4Q9Y661 RPS2P55-201ENST00000397318 883 ntBASIC20.19■□□□□ 0.82
HS3ST4Q9Y661 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HS3ST4Q9Y661 AC107956.1-201ENST00000494359 873 ntBASIC20.19■□□□□ 0.82
HS3ST4Q9Y661 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.19■□□□□ 0.82
HS3ST4Q9Y661 AC093827.2-201ENST00000512654 315 ntBASIC20.19■□□□□ 0.82
HS3ST4Q9Y661 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HS3ST4Q9Y661 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
HS3ST4Q9Y661 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HS3ST4Q9Y661 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HS3ST4Q9Y661 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HS3ST4Q9Y661 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HS3ST4Q9Y661 KRT8P8-201ENST00000434750 1448 ntBASIC20.19■□□□□ 0.82
HS3ST4Q9Y661 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HS3ST4Q9Y661 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.18■□□□□ 0.82
HS3ST4Q9Y661 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.18■□□□□ 0.82
HS3ST4Q9Y661 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HS3ST4Q9Y661 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HS3ST4Q9Y661 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
HS3ST4Q9Y661 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.18■□□□□ 0.82
HS3ST4Q9Y661 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
HS3ST4Q9Y661 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
HS3ST4Q9Y661 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HS3ST4Q9Y661 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.18■□□□□ 0.82
HS3ST4Q9Y661 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.18■□□□□ 0.82
HS3ST4Q9Y661 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HS3ST4Q9Y661 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.18■□□□□ 0.82
HS3ST4Q9Y661 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HS3ST4Q9Y661 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HS3ST4Q9Y661 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.18■□□□□ 0.82
HS3ST4Q9Y661 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HS3ST4Q9Y661 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HS3ST4Q9Y661 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.18■□□□□ 0.82
HS3ST4Q9Y661 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HS3ST4Q9Y661 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
HS3ST4Q9Y661 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HS3ST4Q9Y661 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HS3ST4Q9Y661 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HS3ST4Q9Y661 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HS3ST4Q9Y661 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.17■□□□□ 0.82
HS3ST4Q9Y661 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HS3ST4Q9Y661 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HS3ST4Q9Y661 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
HS3ST4Q9Y661 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.17■□□□□ 0.82
HS3ST4Q9Y661 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
HS3ST4Q9Y661 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.17■□□□□ 0.82
HS3ST4Q9Y661 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.17■□□□□ 0.82
HS3ST4Q9Y661 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.17■□□□□ 0.82
HS3ST4Q9Y661 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.17■□□□□ 0.82
HS3ST4Q9Y661 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.17■□□□□ 0.82
HS3ST4Q9Y661 AF186192.3-201ENST00000583427 947 ntBASIC20.17■□□□□ 0.82
HS3ST4Q9Y661 AC233702.5-201ENST00000584107 538 ntBASIC20.17■□□□□ 0.82
HS3ST4Q9Y661 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HS3ST4Q9Y661 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.17■□□□□ 0.82
HS3ST4Q9Y661 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HS3ST4Q9Y661 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
HS3ST4Q9Y661 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HS3ST4Q9Y661 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HS3ST4Q9Y661 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.17■□□□□ 0.82
HS3ST4Q9Y661 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms