Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SCN10AQ9Y5Y9 COX11P1-201ENST00000489116 835 ntBASIC21.55■■□□□ 1.04
SCN10AQ9Y5Y9 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.55■■□□□ 1.04
SCN10AQ9Y5Y9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SCN10AQ9Y5Y9 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
SCN10AQ9Y5Y9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SCN10AQ9Y5Y9 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SCN10AQ9Y5Y9 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
SCN10AQ9Y5Y9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SCN10AQ9Y5Y9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SCN10AQ9Y5Y9 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SCN10AQ9Y5Y9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCN10AQ9Y5Y9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCN10AQ9Y5Y9 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCN10AQ9Y5Y9 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.54■■□□□ 1.04
SCN10AQ9Y5Y9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCN10AQ9Y5Y9 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCN10AQ9Y5Y9 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.54■■□□□ 1.04
SCN10AQ9Y5Y9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.54■■□□□ 1.04
SCN10AQ9Y5Y9 AC008622.2-201ENST00000617006 1229 ntBASIC21.54■■□□□ 1.04
SCN10AQ9Y5Y9 AC116407.4-201ENST00000623319 1061 ntBASIC21.54■■□□□ 1.04
SCN10AQ9Y5Y9 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
SCN10AQ9Y5Y9 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
SCN10AQ9Y5Y9 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCN10AQ9Y5Y9 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCN10AQ9Y5Y9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCN10AQ9Y5Y9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCN10AQ9Y5Y9 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.54■■□□□ 1.04
SCN10AQ9Y5Y9 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SCN10AQ9Y5Y9 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SCN10AQ9Y5Y9 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SCN10AQ9Y5Y9 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCN10AQ9Y5Y9 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCN10AQ9Y5Y9 AC091076.1-201ENST00000610741 619 ntBASIC21.54■■□□□ 1.04
SCN10AQ9Y5Y9 AC083849.1-201ENST00000615227 514 ntBASIC21.54■■□□□ 1.04
SCN10AQ9Y5Y9 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCN10AQ9Y5Y9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.54■■□□□ 1.04
SCN10AQ9Y5Y9 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.53■■□□□ 1.04
SCN10AQ9Y5Y9 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.53■■□□□ 1.04
SCN10AQ9Y5Y9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SCN10AQ9Y5Y9 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.53■■□□□ 1.04
SCN10AQ9Y5Y9 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SCN10AQ9Y5Y9 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SCN10AQ9Y5Y9 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.53■■□□□ 1.04
SCN10AQ9Y5Y9 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SCN10AQ9Y5Y9 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SCN10AQ9Y5Y9 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.53■■□□□ 1.04
SCN10AQ9Y5Y9 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.53■■□□□ 1.04
SCN10AQ9Y5Y9 AL353719.1-201ENST00000566847 864 ntBASIC21.53■■□□□ 1.04
SCN10AQ9Y5Y9 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.53■■□□□ 1.04
SCN10AQ9Y5Y9 AP000550.4-202ENST00000639755 178 ntBASIC21.53■■□□□ 1.04
SCN10AQ9Y5Y9 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SCN10AQ9Y5Y9 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.52■■□□□ 1.04
SCN10AQ9Y5Y9 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SCN10AQ9Y5Y9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.52■■□□□ 1.04
SCN10AQ9Y5Y9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCN10AQ9Y5Y9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCN10AQ9Y5Y9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCN10AQ9Y5Y9 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCN10AQ9Y5Y9 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
SCN10AQ9Y5Y9 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.52■■□□□ 1.04
SCN10AQ9Y5Y9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCN10AQ9Y5Y9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCN10AQ9Y5Y9 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.52■■□□□ 1.04
SCN10AQ9Y5Y9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.52■■□□□ 1.04
SCN10AQ9Y5Y9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SCN10AQ9Y5Y9 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
SCN10AQ9Y5Y9 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.52■■□□□ 1.04
SCN10AQ9Y5Y9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SCN10AQ9Y5Y9 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCN10AQ9Y5Y9 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SCN10AQ9Y5Y9 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCN10AQ9Y5Y9 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCN10AQ9Y5Y9 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.52■■□□□ 1.04
SCN10AQ9Y5Y9 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.52■■□□□ 1.04
SCN10AQ9Y5Y9 TSPY5P-201ENST00000426936 936 ntBASIC21.52■■□□□ 1.04
SCN10AQ9Y5Y9 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.52■■□□□ 1.04
SCN10AQ9Y5Y9 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SCN10AQ9Y5Y9 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.52■■□□□ 1.04
SCN10AQ9Y5Y9 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.52■■□□□ 1.04
SCN10AQ9Y5Y9 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SCN10AQ9Y5Y9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCN10AQ9Y5Y9 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCN10AQ9Y5Y9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SCN10AQ9Y5Y9 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCN10AQ9Y5Y9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCN10AQ9Y5Y9 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SCN10AQ9Y5Y9 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCN10AQ9Y5Y9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.51■■□□□ 1.03
SCN10AQ9Y5Y9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.51■■□□□ 1.03
SCN10AQ9Y5Y9 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.51■■□□□ 1.03
SCN10AQ9Y5Y9 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.51■■□□□ 1.03
SCN10AQ9Y5Y9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.51■■□□□ 1.03
SCN10AQ9Y5Y9 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.51■■□□□ 1.03
SCN10AQ9Y5Y9 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCN10AQ9Y5Y9 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCN10AQ9Y5Y9 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCN10AQ9Y5Y9 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.5■■□□□ 1.03
SCN10AQ9Y5Y9 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.5■■□□□ 1.03
SCN10AQ9Y5Y9 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms