Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC23.36■■□□□ 1.33
PCDHAC2Q9Y5I4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC23.36■■□□□ 1.33
PCDHAC2Q9Y5I4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC23.36■■□□□ 1.33
PCDHAC2Q9Y5I4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC23.36■■□□□ 1.33
PCDHAC2Q9Y5I4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.36■■□□□ 1.33
PCDHAC2Q9Y5I4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHAC2Q9Y5I4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHAC2Q9Y5I4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHAC2Q9Y5I4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHAC2Q9Y5I4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDHAC2Q9Y5I4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHAC2Q9Y5I4 AC092338.2-201ENST00000568827 1415 ntBASIC23.35■■□□□ 1.33
PCDHAC2Q9Y5I4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.35■■□□□ 1.33
PCDHAC2Q9Y5I4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
PCDHAC2Q9Y5I4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHAC2Q9Y5I4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHAC2Q9Y5I4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC23.35■■□□□ 1.33
PCDHAC2Q9Y5I4 UPK3BP1-201ENST00000428678 509 ntBASIC23.35■■□□□ 1.33
PCDHAC2Q9Y5I4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHAC2Q9Y5I4 AL023803.3-201ENST00000615559 522 ntBASIC23.35■■□□□ 1.33
PCDHAC2Q9Y5I4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
PCDHAC2Q9Y5I4 AC116562.4-202ENST00000641738 218 ntBASIC23.35■■□□□ 1.33
PCDHAC2Q9Y5I4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHAC2Q9Y5I4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHAC2Q9Y5I4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC23.35■■□□□ 1.33
PCDHAC2Q9Y5I4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHAC2Q9Y5I4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
PCDHAC2Q9Y5I4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC23.35■■□□□ 1.33
PCDHAC2Q9Y5I4 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
PCDHAC2Q9Y5I4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHAC2Q9Y5I4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC23.35■■□□□ 1.33
PCDHAC2Q9Y5I4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHAC2Q9Y5I4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHAC2Q9Y5I4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHAC2Q9Y5I4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC23.35■■□□□ 1.33
PCDHAC2Q9Y5I4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
PCDHAC2Q9Y5I4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHAC2Q9Y5I4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHAC2Q9Y5I4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDHAC2Q9Y5I4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHAC2Q9Y5I4 FAM8A6P-201ENST00000407496 1135 ntBASIC23.34■■□□□ 1.33
PCDHAC2Q9Y5I4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC23.34■■□□□ 1.33
PCDHAC2Q9Y5I4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC23.34■■□□□ 1.33
PCDHAC2Q9Y5I4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC23.34■■□□□ 1.33
PCDHAC2Q9Y5I4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
PCDHAC2Q9Y5I4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHAC2Q9Y5I4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
PCDHAC2Q9Y5I4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHAC2Q9Y5I4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHAC2Q9Y5I4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHAC2Q9Y5I4 KRT8P8-201ENST00000434750 1448 ntBASIC23.33■■□□□ 1.33
PCDHAC2Q9Y5I4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHAC2Q9Y5I4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
PCDHAC2Q9Y5I4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
PCDHAC2Q9Y5I4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.33
PCDHAC2Q9Y5I4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC23.33■■□□□ 1.33
PCDHAC2Q9Y5I4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHAC2Q9Y5I4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHAC2Q9Y5I4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC23.33■■□□□ 1.33
PCDHAC2Q9Y5I4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHAC2Q9Y5I4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC23.33■■□□□ 1.33
PCDHAC2Q9Y5I4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC23.33■■□□□ 1.33
PCDHAC2Q9Y5I4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC23.33■■□□□ 1.33
PCDHAC2Q9Y5I4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC23.33■■□□□ 1.33
PCDHAC2Q9Y5I4 AC011558.1-201ENST00000623459 338 ntBASIC23.33■■□□□ 1.33
PCDHAC2Q9Y5I4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
PCDHAC2Q9Y5I4 AC007375.3-201ENST00000600936 2314 ntBASIC23.33■■□□□ 1.33
PCDHAC2Q9Y5I4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PCDHAC2Q9Y5I4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PCDHAC2Q9Y5I4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PCDHAC2Q9Y5I4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
PCDHAC2Q9Y5I4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
PCDHAC2Q9Y5I4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHAC2Q9Y5I4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
PCDHAC2Q9Y5I4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC23.32■■□□□ 1.32
PCDHAC2Q9Y5I4 RNF152P1-201ENST00000397754 604 ntBASIC23.32■■□□□ 1.32
PCDHAC2Q9Y5I4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC23.32■■□□□ 1.32
PCDHAC2Q9Y5I4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
PCDHAC2Q9Y5I4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC23.32■■□□□ 1.32
PCDHAC2Q9Y5I4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC23.32■■□□□ 1.32
PCDHAC2Q9Y5I4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC23.32■■□□□ 1.32
PCDHAC2Q9Y5I4 FEM1AP1-201ENST00000431297 1995 ntBASIC23.32■■□□□ 1.32
PCDHAC2Q9Y5I4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHAC2Q9Y5I4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHAC2Q9Y5I4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
PCDHAC2Q9Y5I4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHAC2Q9Y5I4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHAC2Q9Y5I4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDHAC2Q9Y5I4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHAC2Q9Y5I4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDHAC2Q9Y5I4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC23.31■■□□□ 1.32
PCDHAC2Q9Y5I4 COPE-203ENST00000351079 907 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDHAC2Q9Y5I4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDHAC2Q9Y5I4 SAPCD2P2-201ENST00000431719 1174 ntBASIC23.31■■□□□ 1.32
PCDHAC2Q9Y5I4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC23.31■■□□□ 1.32
PCDHAC2Q9Y5I4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC23.31■■□□□ 1.32
PCDHAC2Q9Y5I4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
PCDHAC2Q9Y5I4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC23.31■■□□□ 1.32
PCDHAC2Q9Y5I4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDHAC2Q9Y5I4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms