Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC24.79■■□□□ 1.56
RTCBQ9Y3I0 AC006128.1-201ENST00000624704 1661 ntBASIC24.79■■□□□ 1.56
RTCBQ9Y3I0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
RTCBQ9Y3I0 AL117328.2-201ENST00000624617 1940 ntBASIC24.79■■□□□ 1.56
RTCBQ9Y3I0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC24.79■■□□□ 1.56
RTCBQ9Y3I0 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC24.79■■□□□ 1.56
RTCBQ9Y3I0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC24.79■■□□□ 1.56
RTCBQ9Y3I0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC24.79■■□□□ 1.56
RTCBQ9Y3I0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC24.79■■□□□ 1.56
RTCBQ9Y3I0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RTCBQ9Y3I0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
RTCBQ9Y3I0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC24.79■■□□□ 1.56
RTCBQ9Y3I0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RTCBQ9Y3I0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RTCBQ9Y3I0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
RTCBQ9Y3I0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RTCBQ9Y3I0 AC007225.1-201ENST00000566331 1836 ntBASIC24.78■■□□□ 1.56
RTCBQ9Y3I0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RTCBQ9Y3I0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RTCBQ9Y3I0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RTCBQ9Y3I0 KRT18P38-201ENST00000449496 1282 ntBASIC24.78■■□□□ 1.56
RTCBQ9Y3I0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC24.78■■□□□ 1.56
RTCBQ9Y3I0 AL160286.2-201ENST00000567150 934 ntBASIC24.78■■□□□ 1.56
RTCBQ9Y3I0 AC069148.1-201ENST00000608741 768 ntBASIC24.78■■□□□ 1.56
RTCBQ9Y3I0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC24.78■■□□□ 1.56
RTCBQ9Y3I0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
RTCBQ9Y3I0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RTCBQ9Y3I0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RTCBQ9Y3I0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RTCBQ9Y3I0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
RTCBQ9Y3I0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RTCBQ9Y3I0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RTCBQ9Y3I0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
RTCBQ9Y3I0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RTCBQ9Y3I0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC24.77■■□□□ 1.56
RTCBQ9Y3I0 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RTCBQ9Y3I0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
RTCBQ9Y3I0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC24.77■■□□□ 1.56
RTCBQ9Y3I0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
RTCBQ9Y3I0 CLEC4GP1-201ENST00000596555 870 ntBASIC24.77■■□□□ 1.56
RTCBQ9Y3I0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC24.77■■□□□ 1.56
RTCBQ9Y3I0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
RTCBQ9Y3I0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
RTCBQ9Y3I0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RTCBQ9Y3I0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RTCBQ9Y3I0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
RTCBQ9Y3I0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
RTCBQ9Y3I0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RTCBQ9Y3I0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC24.76■■□□□ 1.55
RTCBQ9Y3I0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
RTCBQ9Y3I0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RTCBQ9Y3I0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RTCBQ9Y3I0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RTCBQ9Y3I0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
RTCBQ9Y3I0 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RTCBQ9Y3I0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC24.76■■□□□ 1.55
RTCBQ9Y3I0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RTCBQ9Y3I0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC24.76■■□□□ 1.55
RTCBQ9Y3I0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC24.76■■□□□ 1.55
RTCBQ9Y3I0 AP003041.3-201ENST00000527151 707 ntBASIC24.76■■□□□ 1.55
RTCBQ9Y3I0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RTCBQ9Y3I0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RTCBQ9Y3I0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RTCBQ9Y3I0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RTCBQ9Y3I0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RTCBQ9Y3I0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
RTCBQ9Y3I0 BID-203ENST00000399765 1879 ntTSL 2 BASIC24.75■■□□□ 1.55
RTCBQ9Y3I0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RTCBQ9Y3I0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC24.75■■□□□ 1.55
RTCBQ9Y3I0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC24.75■■□□□ 1.55
RTCBQ9Y3I0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC24.75■■□□□ 1.55
RTCBQ9Y3I0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RTCBQ9Y3I0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC24.75■■□□□ 1.55
RTCBQ9Y3I0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC24.75■■□□□ 1.55
RTCBQ9Y3I0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC24.75■■□□□ 1.55
RTCBQ9Y3I0 VPS72-207ENST00000640458 689 ntTSL 5 BASIC24.75■■□□□ 1.55
RTCBQ9Y3I0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RTCBQ9Y3I0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
RTCBQ9Y3I0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
RTCBQ9Y3I0 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RTCBQ9Y3I0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RTCBQ9Y3I0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
RTCBQ9Y3I0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
RTCBQ9Y3I0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC24.74■■□□□ 1.55
RTCBQ9Y3I0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RTCBQ9Y3I0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RTCBQ9Y3I0 AF106564.1-201ENST00000607058 2553 ntBASIC24.74■■□□□ 1.55
RTCBQ9Y3I0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RTCBQ9Y3I0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RTCBQ9Y3I0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RTCBQ9Y3I0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RTCBQ9Y3I0 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC24.74■■□□□ 1.55
RTCBQ9Y3I0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC24.74■■□□□ 1.55
RTCBQ9Y3I0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC24.74■■□□□ 1.55
RTCBQ9Y3I0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC24.74■■□□□ 1.55
RTCBQ9Y3I0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RTCBQ9Y3I0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
RTCBQ9Y3I0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.74■■□□□ 1.55
RTCBQ9Y3I0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RTCBQ9Y3I0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms