Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZC3H4Q9UPT8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC23.8■■□□□ 1.4
ZC3H4Q9UPT8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZC3H4Q9UPT8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC23.8■■□□□ 1.4
ZC3H4Q9UPT8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZC3H4Q9UPT8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ZC3H4Q9UPT8 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZC3H4Q9UPT8 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZC3H4Q9UPT8 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ZC3H4Q9UPT8 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZC3H4Q9UPT8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZC3H4Q9UPT8 AL845331.1-201ENST00000424978 1190 ntBASIC23.8■■□□□ 1.4
ZC3H4Q9UPT8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC23.8■■□□□ 1.4
ZC3H4Q9UPT8 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC23.8■■□□□ 1.4
ZC3H4Q9UPT8 SKP2-204ENST00000508514 821 ntTSL 3 BASIC23.8■■□□□ 1.4
ZC3H4Q9UPT8 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC23.8■■□□□ 1.4
ZC3H4Q9UPT8 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZC3H4Q9UPT8 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZC3H4Q9UPT8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
ZC3H4Q9UPT8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.79■■□□□ 1.4
ZC3H4Q9UPT8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ZC3H4Q9UPT8 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZC3H4Q9UPT8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC23.79■■□□□ 1.4
ZC3H4Q9UPT8 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ZC3H4Q9UPT8 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
ZC3H4Q9UPT8 NEK4P2-201ENST00000580004 1012 ntBASIC23.79■■□□□ 1.4
ZC3H4Q9UPT8 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC23.79■■□□□ 1.4
ZC3H4Q9UPT8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC23.79■■□□□ 1.4
ZC3H4Q9UPT8 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
ZC3H4Q9UPT8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.79■■□□□ 1.4
ZC3H4Q9UPT8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.79■■□□□ 1.4
ZC3H4Q9UPT8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.79■■□□□ 1.4
ZC3H4Q9UPT8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZC3H4Q9UPT8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC23.78■■□□□ 1.4
ZC3H4Q9UPT8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ZC3H4Q9UPT8 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC23.78■■□□□ 1.4
ZC3H4Q9UPT8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC23.78■■□□□ 1.4
ZC3H4Q9UPT8 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZC3H4Q9UPT8 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC23.78■■□□□ 1.4
ZC3H4Q9UPT8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ZC3H4Q9UPT8 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZC3H4Q9UPT8 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ZC3H4Q9UPT8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZC3H4Q9UPT8 ECEL1P1-201ENST00000373592 1742 ntBASIC23.78■■□□□ 1.4
ZC3H4Q9UPT8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZC3H4Q9UPT8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZC3H4Q9UPT8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZC3H4Q9UPT8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ZC3H4Q9UPT8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZC3H4Q9UPT8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
ZC3H4Q9UPT8 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZC3H4Q9UPT8 LINC01311-201ENST00000565162 1445 ntBASIC23.77■■□□□ 1.4
ZC3H4Q9UPT8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC23.77■■□□□ 1.4
ZC3H4Q9UPT8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZC3H4Q9UPT8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ZC3H4Q9UPT8 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZC3H4Q9UPT8 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC23.77■■□□□ 1.4
ZC3H4Q9UPT8 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC23.77■■□□□ 1.4
ZC3H4Q9UPT8 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC23.77■■□□□ 1.4
ZC3H4Q9UPT8 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC23.77■■□□□ 1.4
ZC3H4Q9UPT8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZC3H4Q9UPT8 AC092119.3-201ENST00000612618 583 ntBASIC23.77■■□□□ 1.4
ZC3H4Q9UPT8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZC3H4Q9UPT8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC23.77■■□□□ 1.4
ZC3H4Q9UPT8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
ZC3H4Q9UPT8 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC23.77■■□□□ 1.39
ZC3H4Q9UPT8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ZC3H4Q9UPT8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.76■■□□□ 1.39
ZC3H4Q9UPT8 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.76■■□□□ 1.39
ZC3H4Q9UPT8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ZC3H4Q9UPT8 GOLGA6L3-201ENST00000507199 1679 ntBASIC23.76■■□□□ 1.39
ZC3H4Q9UPT8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ZC3H4Q9UPT8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ZC3H4Q9UPT8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ZC3H4Q9UPT8 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ZC3H4Q9UPT8 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC23.76■■□□□ 1.39
ZC3H4Q9UPT8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC23.76■■□□□ 1.39
ZC3H4Q9UPT8 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
ZC3H4Q9UPT8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ZC3H4Q9UPT8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
ZC3H4Q9UPT8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
ZC3H4Q9UPT8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ZC3H4Q9UPT8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ZC3H4Q9UPT8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC23.75■■□□□ 1.39
ZC3H4Q9UPT8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC23.75■■□□□ 1.39
ZC3H4Q9UPT8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ZC3H4Q9UPT8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
ZC3H4Q9UPT8 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.75■■□□□ 1.39
ZC3H4Q9UPT8 AL022342.1-201ENST00000400363 863 ntBASIC23.75■■□□□ 1.39
ZC3H4Q9UPT8 DERL1-203ENST00000419562 918 ntTSL 2 BASIC23.75■■□□□ 1.39
ZC3H4Q9UPT8 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC23.75■■□□□ 1.39
ZC3H4Q9UPT8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC23.75■■□□□ 1.39
ZC3H4Q9UPT8 Z85996.1-201ENST00000494644 937 ntBASIC23.75■■□□□ 1.39
ZC3H4Q9UPT8 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC23.75■■□□□ 1.39
ZC3H4Q9UPT8 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC23.75■■□□□ 1.39
ZC3H4Q9UPT8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.75■■□□□ 1.39
ZC3H4Q9UPT8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
ZC3H4Q9UPT8 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC23.75■■□□□ 1.39
ZC3H4Q9UPT8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC23.75■■□□□ 1.39
ZC3H4Q9UPT8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms