Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
SPHK1Q9NYA1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SPHK1Q9NYA1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.91■□□□□ 0.62
SPHK1Q9NYA1 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.91■□□□□ 0.62
SPHK1Q9NYA1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.91■□□□□ 0.62
SPHK1Q9NYA1 AC233702.5-201ENST00000584107 538 ntBASIC18.91■□□□□ 0.62
SPHK1Q9NYA1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.91■□□□□ 0.62
SPHK1Q9NYA1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.91■□□□□ 0.62
SPHK1Q9NYA1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.91■□□□□ 0.62
SPHK1Q9NYA1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SPHK1Q9NYA1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPHK1Q9NYA1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPHK1Q9NYA1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.91■□□□□ 0.62
SPHK1Q9NYA1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.91■□□□□ 0.62
SPHK1Q9NYA1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.91■□□□□ 0.62
SPHK1Q9NYA1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPHK1Q9NYA1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SPHK1Q9NYA1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SPHK1Q9NYA1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.91■□□□□ 0.62
SPHK1Q9NYA1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SPHK1Q9NYA1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SPHK1Q9NYA1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SPHK1Q9NYA1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPHK1Q9NYA1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SPHK1Q9NYA1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPHK1Q9NYA1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPHK1Q9NYA1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPHK1Q9NYA1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPHK1Q9NYA1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPHK1Q9NYA1 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SPHK1Q9NYA1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.9■□□□□ 0.62
SPHK1Q9NYA1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SPHK1Q9NYA1 AL596275.1-201ENST00000423464 877 ntBASIC18.9■□□□□ 0.62
SPHK1Q9NYA1 AC012618.2-201ENST00000428058 849 ntBASIC18.9■□□□□ 0.62
SPHK1Q9NYA1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.9■□□□□ 0.62
SPHK1Q9NYA1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.9■□□□□ 0.62
SPHK1Q9NYA1 AF186192.3-201ENST00000583427 947 ntBASIC18.9■□□□□ 0.62
SPHK1Q9NYA1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.9■□□□□ 0.62
SPHK1Q9NYA1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SPHK1Q9NYA1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SPHK1Q9NYA1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPHK1Q9NYA1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SPHK1Q9NYA1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.89■□□□□ 0.62
SPHK1Q9NYA1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPHK1Q9NYA1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SPHK1Q9NYA1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SPHK1Q9NYA1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
SPHK1Q9NYA1 MIR718-201ENST00000390190 70 ntBASIC18.89■□□□□ 0.61
SPHK1Q9NYA1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.89■□□□□ 0.61
SPHK1Q9NYA1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.89■□□□□ 0.61
SPHK1Q9NYA1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.89■□□□□ 0.61
SPHK1Q9NYA1 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.89■□□□□ 0.61
SPHK1Q9NYA1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.89■□□□□ 0.61
SPHK1Q9NYA1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SPHK1Q9NYA1 AL135905.2-201ENST00000584934 1404 ntBASIC18.89■□□□□ 0.61
SPHK1Q9NYA1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPHK1Q9NYA1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPHK1Q9NYA1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.89■□□□□ 0.61
SPHK1Q9NYA1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.89■□□□□ 0.61
SPHK1Q9NYA1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPHK1Q9NYA1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.89■□□□□ 0.61
SPHK1Q9NYA1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.89■□□□□ 0.61
SPHK1Q9NYA1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPHK1Q9NYA1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.89■□□□□ 0.61
SPHK1Q9NYA1 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPHK1Q9NYA1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPHK1Q9NYA1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.88■□□□□ 0.61
SPHK1Q9NYA1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPHK1Q9NYA1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPHK1Q9NYA1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPHK1Q9NYA1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPHK1Q9NYA1 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SPHK1Q9NYA1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SPHK1Q9NYA1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.88■□□□□ 0.61
SPHK1Q9NYA1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SPHK1Q9NYA1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.88■□□□□ 0.61
SPHK1Q9NYA1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.88■□□□□ 0.61
SPHK1Q9NYA1 C1QL1P1-201ENST00000568105 661 ntBASIC18.88■□□□□ 0.61
SPHK1Q9NYA1 AL049637.2-201ENST00000641778 930 ntBASIC18.88■□□□□ 0.61
SPHK1Q9NYA1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.88■□□□□ 0.61
SPHK1Q9NYA1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPHK1Q9NYA1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SPHK1Q9NYA1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPHK1Q9NYA1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SPHK1Q9NYA1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPHK1Q9NYA1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPHK1Q9NYA1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.88■□□□□ 0.61
SPHK1Q9NYA1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SPHK1Q9NYA1 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPHK1Q9NYA1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPHK1Q9NYA1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SPHK1Q9NYA1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
SPHK1Q9NYA1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPHK1Q9NYA1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.87■□□□□ 0.61
SPHK1Q9NYA1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.87■□□□□ 0.61
SPHK1Q9NYA1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPHK1Q9NYA1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.87■□□□□ 0.61
SPHK1Q9NYA1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPHK1Q9NYA1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPHK1Q9NYA1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms