Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AL354811.1-201ENST00000610286 706 ntBASIC18.95■□□□□ 0.62
NDE1Q9NXR1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.95■□□□□ 0.62
NDE1Q9NXR1 DUX4L6-201ENST00000626483 1275 ntBASIC18.95■□□□□ 0.62
NDE1Q9NXR1 DUX4L1-201ENST00000627662 1275 ntBASIC18.95■□□□□ 0.62
NDE1Q9NXR1 DUX4L8-201ENST00000629013 1275 ntBASIC18.95■□□□□ 0.62
NDE1Q9NXR1 DUX4L3-201ENST00000630187 1275 ntBASIC18.95■□□□□ 0.62
NDE1Q9NXR1 DUX4L7-201ENST00000630678 1275 ntBASIC18.95■□□□□ 0.62
NDE1Q9NXR1 DUX4L5-201ENST00000630834 1275 ntBASIC18.95■□□□□ 0.62
NDE1Q9NXR1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NDE1Q9NXR1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
NDE1Q9NXR1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NDE1Q9NXR1 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
NDE1Q9NXR1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
NDE1Q9NXR1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NDE1Q9NXR1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
NDE1Q9NXR1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NDE1Q9NXR1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
NDE1Q9NXR1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NDE1Q9NXR1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NDE1Q9NXR1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NDE1Q9NXR1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NDE1Q9NXR1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.94■□□□□ 0.62
NDE1Q9NXR1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
NDE1Q9NXR1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.94■□□□□ 0.62
NDE1Q9NXR1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NDE1Q9NXR1 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NDE1Q9NXR1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
NDE1Q9NXR1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NDE1Q9NXR1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
NDE1Q9NXR1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
NDE1Q9NXR1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.94■□□□□ 0.62
NDE1Q9NXR1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.94■□□□□ 0.62
NDE1Q9NXR1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NDE1Q9NXR1 AL136116.3-201ENST00000402907 1138 ntBASIC18.94■□□□□ 0.62
NDE1Q9NXR1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.94■□□□□ 0.62
NDE1Q9NXR1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NDE1Q9NXR1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.94■□□□□ 0.62
NDE1Q9NXR1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.94■□□□□ 0.62
NDE1Q9NXR1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.94■□□□□ 0.62
NDE1Q9NXR1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.94■□□□□ 0.62
NDE1Q9NXR1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
NDE1Q9NXR1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NDE1Q9NXR1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
NDE1Q9NXR1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.94■□□□□ 0.62
NDE1Q9NXR1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.94■□□□□ 0.62
NDE1Q9NXR1 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
NDE1Q9NXR1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NDE1Q9NXR1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.93■□□□□ 0.62
NDE1Q9NXR1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
NDE1Q9NXR1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NDE1Q9NXR1 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NDE1Q9NXR1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NDE1Q9NXR1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NDE1Q9NXR1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.93■□□□□ 0.62
NDE1Q9NXR1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NDE1Q9NXR1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NDE1Q9NXR1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NDE1Q9NXR1 CDV3P1-201ENST00000471403 739 ntBASIC18.93■□□□□ 0.62
NDE1Q9NXR1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.93■□□□□ 0.62
NDE1Q9NXR1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.93■□□□□ 0.62
NDE1Q9NXR1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NDE1Q9NXR1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NDE1Q9NXR1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.93■□□□□ 0.62
NDE1Q9NXR1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NDE1Q9NXR1 AL133373.2-201ENST00000623187 2828 ntBASIC18.93■□□□□ 0.62
NDE1Q9NXR1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
NDE1Q9NXR1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NDE1Q9NXR1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NDE1Q9NXR1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NDE1Q9NXR1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NDE1Q9NXR1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.93■□□□□ 0.62
NDE1Q9NXR1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NDE1Q9NXR1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.92■□□□□ 0.62
NDE1Q9NXR1 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NDE1Q9NXR1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.92■□□□□ 0.62
NDE1Q9NXR1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NDE1Q9NXR1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
NDE1Q9NXR1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NDE1Q9NXR1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NDE1Q9NXR1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NDE1Q9NXR1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
NDE1Q9NXR1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NDE1Q9NXR1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NDE1Q9NXR1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NDE1Q9NXR1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.92■□□□□ 0.62
NDE1Q9NXR1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.92■□□□□ 0.62
NDE1Q9NXR1 CCDC92B-201ENST00000575506 885 ntBASIC18.92■□□□□ 0.62
NDE1Q9NXR1 AL356652.1-201ENST00000615962 565 ntBASIC18.92■□□□□ 0.62
NDE1Q9NXR1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NDE1Q9NXR1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.92■□□□□ 0.62
NDE1Q9NXR1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NDE1Q9NXR1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NDE1Q9NXR1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
NDE1Q9NXR1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NDE1Q9NXR1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.91■□□□□ 0.62
NDE1Q9NXR1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
NDE1Q9NXR1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NDE1Q9NXR1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NDE1Q9NXR1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NDE1Q9NXR1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms