Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC28.17■■■□□ 2.1
SLC52A1Q9NWF4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC28.17■■■□□ 2.1
SLC52A1Q9NWF4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC28.17■■■□□ 2.1
SLC52A1Q9NWF4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC28.17■■■□□ 2.1
SLC52A1Q9NWF4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SLC52A1Q9NWF4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC28.16■■■□□ 2.1
SLC52A1Q9NWF4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SLC52A1Q9NWF4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SLC52A1Q9NWF4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SLC52A1Q9NWF4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
SLC52A1Q9NWF4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC28.16■■■□□ 2.1
SLC52A1Q9NWF4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
SLC52A1Q9NWF4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC28.16■■■□□ 2.1
SLC52A1Q9NWF4 DUSP5P1-201ENST00000441325 1139 ntBASIC28.16■■■□□ 2.1
SLC52A1Q9NWF4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC28.16■■■□□ 2.1
SLC52A1Q9NWF4 AL121894.2-201ENST00000602977 491 ntBASIC28.16■■■□□ 2.1
SLC52A1Q9NWF4 AL023973.1-201ENST00000624619 620 ntBASIC28.16■■■□□ 2.1
SLC52A1Q9NWF4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
SLC52A1Q9NWF4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
SLC52A1Q9NWF4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SLC52A1Q9NWF4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC28.16■■■□□ 2.1
SLC52A1Q9NWF4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
SLC52A1Q9NWF4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SLC52A1Q9NWF4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
SLC52A1Q9NWF4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SLC52A1Q9NWF4 AC005332.1-201ENST00000577698 1310 ntBASIC28.16■■■□□ 2.1
SLC52A1Q9NWF4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SLC52A1Q9NWF4 BX119927.1-201ENST00000636596 1552 ntBASIC28.16■■■□□ 2.1
SLC52A1Q9NWF4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
SLC52A1Q9NWF4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC28.15■■■□□ 2.1
SLC52A1Q9NWF4 KRT8P41-201ENST00000533985 1514 ntBASIC28.15■■■□□ 2.1
SLC52A1Q9NWF4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
SLC52A1Q9NWF4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
SLC52A1Q9NWF4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
SLC52A1Q9NWF4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC28.15■■■□□ 2.1
SLC52A1Q9NWF4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC28.15■■■□□ 2.1
SLC52A1Q9NWF4 AP003041.3-201ENST00000527151 707 ntBASIC28.15■■■□□ 2.1
SLC52A1Q9NWF4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
SLC52A1Q9NWF4 AC140113.3-201ENST00000605663 199 ntBASIC28.15■■■□□ 2.1
SLC52A1Q9NWF4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SLC52A1Q9NWF4 AC079834.2-201ENST00000609776 1949 ntBASIC28.15■■■□□ 2.1
SLC52A1Q9NWF4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC28.15■■■□□ 2.1
SLC52A1Q9NWF4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
SLC52A1Q9NWF4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC28.15■■■□□ 2.1
SLC52A1Q9NWF4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SLC52A1Q9NWF4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
SLC52A1Q9NWF4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
SLC52A1Q9NWF4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
SLC52A1Q9NWF4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC28.14■■■□□ 2.1
SLC52A1Q9NWF4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
SLC52A1Q9NWF4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
SLC52A1Q9NWF4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
SLC52A1Q9NWF4 AL359075.1-203ENST00000462729 1002 ntBASIC28.14■■■□□ 2.1
SLC52A1Q9NWF4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC28.14■■■□□ 2.1
SLC52A1Q9NWF4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
SLC52A1Q9NWF4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC28.14■■■□□ 2.1
SLC52A1Q9NWF4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC28.14■■■□□ 2.1
SLC52A1Q9NWF4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC28.14■■■□□ 2.1
SLC52A1Q9NWF4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC28.14■■■□□ 2.1
SLC52A1Q9NWF4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC28.14■■■□□ 2.1
SLC52A1Q9NWF4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
SLC52A1Q9NWF4 SMG8-203ENST00000578922 2178 ntBASIC28.14■■■□□ 2.09
SLC52A1Q9NWF4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
SLC52A1Q9NWF4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
SLC52A1Q9NWF4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC28.14■■■□□ 2.09
SLC52A1Q9NWF4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC28.13■■■□□ 2.09
SLC52A1Q9NWF4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC28.13■■■□□ 2.09
SLC52A1Q9NWF4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
SLC52A1Q9NWF4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SLC52A1Q9NWF4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SLC52A1Q9NWF4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC28.13■■■□□ 2.09
SLC52A1Q9NWF4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC28.13■■■□□ 2.09
SLC52A1Q9NWF4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
SLC52A1Q9NWF4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
SLC52A1Q9NWF4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SLC52A1Q9NWF4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SLC52A1Q9NWF4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
SLC52A1Q9NWF4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
SLC52A1Q9NWF4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SLC52A1Q9NWF4 AP001271.2-201ENST00000624018 1556 ntBASIC28.12■■■□□ 2.09
SLC52A1Q9NWF4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC28.12■■■□□ 2.09
SLC52A1Q9NWF4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
SLC52A1Q9NWF4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SLC52A1Q9NWF4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC28.12■■■□□ 2.09
SLC52A1Q9NWF4 KRT18P38-201ENST00000449496 1282 ntBASIC28.12■■■□□ 2.09
SLC52A1Q9NWF4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC28.12■■■□□ 2.09
SLC52A1Q9NWF4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC28.12■■■□□ 2.09
SLC52A1Q9NWF4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
SLC52A1Q9NWF4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
SLC52A1Q9NWF4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC28.12■■■□□ 2.09
SLC52A1Q9NWF4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
SLC52A1Q9NWF4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SLC52A1Q9NWF4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
SLC52A1Q9NWF4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
SLC52A1Q9NWF4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC28.11■■■□□ 2.09
SLC52A1Q9NWF4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SLC52A1Q9NWF4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC28.11■■■□□ 2.09
SLC52A1Q9NWF4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
SLC52A1Q9NWF4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC28.11■■■□□ 2.09
SLC52A1Q9NWF4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms