Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RLIMQ9NVW2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RLIMQ9NVW2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RLIMQ9NVW2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.23■□□□□ 0.51
RLIMQ9NVW2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RLIMQ9NVW2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RLIMQ9NVW2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.23■□□□□ 0.51
RLIMQ9NVW2 AL032819.2-201ENST00000624543 2162 ntBASIC18.23■□□□□ 0.51
RLIMQ9NVW2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.23■□□□□ 0.51
RLIMQ9NVW2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RLIMQ9NVW2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RLIMQ9NVW2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RLIMQ9NVW2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.23■□□□□ 0.51
RLIMQ9NVW2 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.23■□□□□ 0.51
RLIMQ9NVW2 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.23■□□□□ 0.51
RLIMQ9NVW2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.23■□□□□ 0.51
RLIMQ9NVW2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.23■□□□□ 0.51
RLIMQ9NVW2 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.23■□□□□ 0.51
RLIMQ9NVW2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.23■□□□□ 0.51
RLIMQ9NVW2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.23■□□□□ 0.51
RLIMQ9NVW2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RLIMQ9NVW2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RLIMQ9NVW2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RLIMQ9NVW2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RLIMQ9NVW2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
RLIMQ9NVW2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.23■□□□□ 0.51
RLIMQ9NVW2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RLIMQ9NVW2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RLIMQ9NVW2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RLIMQ9NVW2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RLIMQ9NVW2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RLIMQ9NVW2 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RLIMQ9NVW2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RLIMQ9NVW2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.22■□□□□ 0.51
RLIMQ9NVW2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RLIMQ9NVW2 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RLIMQ9NVW2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RLIMQ9NVW2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RLIMQ9NVW2 AP001271.2-201ENST00000624018 1556 ntBASIC18.22■□□□□ 0.51
RLIMQ9NVW2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RLIMQ9NVW2 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RLIMQ9NVW2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.22■□□□□ 0.51
RLIMQ9NVW2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RLIMQ9NVW2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RLIMQ9NVW2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RLIMQ9NVW2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RLIMQ9NVW2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RLIMQ9NVW2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
RLIMQ9NVW2 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RLIMQ9NVW2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.22■□□□□ 0.51
RLIMQ9NVW2 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RLIMQ9NVW2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.22■□□□□ 0.51
RLIMQ9NVW2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RLIMQ9NVW2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.22■□□□□ 0.51
RLIMQ9NVW2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
RLIMQ9NVW2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RLIMQ9NVW2 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.21■□□□□ 0.51
RLIMQ9NVW2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
RLIMQ9NVW2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
RLIMQ9NVW2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RLIMQ9NVW2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RLIMQ9NVW2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RLIMQ9NVW2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RLIMQ9NVW2 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RLIMQ9NVW2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RLIMQ9NVW2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.21■□□□□ 0.51
RLIMQ9NVW2 DUSP5P2-201ENST00000426873 1033 ntBASIC18.21■□□□□ 0.51
RLIMQ9NVW2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.21■□□□□ 0.51
RLIMQ9NVW2 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.21■□□□□ 0.51
RLIMQ9NVW2 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.21■□□□□ 0.51
RLIMQ9NVW2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RLIMQ9NVW2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.21■□□□□ 0.51
RLIMQ9NVW2 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
RLIMQ9NVW2 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RLIMQ9NVW2 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RLIMQ9NVW2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RLIMQ9NVW2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.21■□□□□ 0.51
RLIMQ9NVW2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.21■□□□□ 0.51
RLIMQ9NVW2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RLIMQ9NVW2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
RLIMQ9NVW2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.21■□□□□ 0.5
RLIMQ9NVW2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
RLIMQ9NVW2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RLIMQ9NVW2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RLIMQ9NVW2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RLIMQ9NVW2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RLIMQ9NVW2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RLIMQ9NVW2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.2■□□□□ 0.5
RLIMQ9NVW2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.2■□□□□ 0.5
RLIMQ9NVW2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RLIMQ9NVW2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RLIMQ9NVW2 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.2■□□□□ 0.5
RLIMQ9NVW2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.2■□□□□ 0.5
RLIMQ9NVW2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.2■□□□□ 0.5
RLIMQ9NVW2 NCF1B-203ENST00000435988 1254 ntBASIC18.2■□□□□ 0.5
RLIMQ9NVW2 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.2■□□□□ 0.5
RLIMQ9NVW2 GUSBP6-202ENST00000438529 1198 ntBASIC18.2■□□□□ 0.5
RLIMQ9NVW2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.2■□□□□ 0.5
RLIMQ9NVW2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.2■□□□□ 0.5
RLIMQ9NVW2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms