Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
ECHDC1Q9NTX5 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
ECHDC1Q9NTX5 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
ECHDC1Q9NTX5 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
ECHDC1Q9NTX5 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
ECHDC1Q9NTX5 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ECHDC1Q9NTX5 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
ECHDC1Q9NTX5 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC23.9■■□□□ 1.42
ECHDC1Q9NTX5 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ECHDC1Q9NTX5 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC23.9■■□□□ 1.42
ECHDC1Q9NTX5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
ECHDC1Q9NTX5 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.42
ECHDC1Q9NTX5 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC23.89■■□□□ 1.42
ECHDC1Q9NTX5 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
ECHDC1Q9NTX5 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
ECHDC1Q9NTX5 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
ECHDC1Q9NTX5 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC23.89■■□□□ 1.42
ECHDC1Q9NTX5 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
ECHDC1Q9NTX5 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
ECHDC1Q9NTX5 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
ECHDC1Q9NTX5 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC23.89■■□□□ 1.41
ECHDC1Q9NTX5 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC23.89■■□□□ 1.41
ECHDC1Q9NTX5 AC004264.1-201ENST00000608354 794 ntBASIC23.89■■□□□ 1.41
ECHDC1Q9NTX5 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC23.89■■□□□ 1.41
ECHDC1Q9NTX5 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
ECHDC1Q9NTX5 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
ECHDC1Q9NTX5 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
ECHDC1Q9NTX5 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
ECHDC1Q9NTX5 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
ECHDC1Q9NTX5 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ECHDC1Q9NTX5 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC23.88■■□□□ 1.41
ECHDC1Q9NTX5 KRT8P8-201ENST00000434750 1448 ntBASIC23.88■■□□□ 1.41
ECHDC1Q9NTX5 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC23.88■■□□□ 1.41
ECHDC1Q9NTX5 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC23.88■■□□□ 1.41
ECHDC1Q9NTX5 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC23.88■■□□□ 1.41
ECHDC1Q9NTX5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC23.88■■□□□ 1.41
ECHDC1Q9NTX5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC23.88■■□□□ 1.41
ECHDC1Q9NTX5 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC23.88■■□□□ 1.41
ECHDC1Q9NTX5 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ECHDC1Q9NTX5 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ECHDC1Q9NTX5 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ECHDC1Q9NTX5 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC23.88■■□□□ 1.41
ECHDC1Q9NTX5 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
ECHDC1Q9NTX5 POLI-202ENST00000406285 2030 ntTSL 2 BASIC23.88■■□□□ 1.41
ECHDC1Q9NTX5 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC23.87■■□□□ 1.41
ECHDC1Q9NTX5 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ECHDC1Q9NTX5 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC23.87■■□□□ 1.41
ECHDC1Q9NTX5 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ECHDC1Q9NTX5 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC23.87■■□□□ 1.41
ECHDC1Q9NTX5 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ECHDC1Q9NTX5 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
ECHDC1Q9NTX5 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC23.87■■□□□ 1.41
ECHDC1Q9NTX5 GCSHP5-201ENST00000443090 522 ntBASIC23.87■■□□□ 1.41
ECHDC1Q9NTX5 KRT16P5-201ENST00000455284 522 ntBASIC23.87■■□□□ 1.41
ECHDC1Q9NTX5 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC23.87■■□□□ 1.41
ECHDC1Q9NTX5 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC23.87■■□□□ 1.41
ECHDC1Q9NTX5 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC23.87■■□□□ 1.41
ECHDC1Q9NTX5 TMEM191A-211ENST00000637163 1067 ntBASIC23.87■■□□□ 1.41
ECHDC1Q9NTX5 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
ECHDC1Q9NTX5 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ECHDC1Q9NTX5 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
ECHDC1Q9NTX5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.87■■□□□ 1.41
ECHDC1Q9NTX5 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC23.87■■□□□ 1.41
ECHDC1Q9NTX5 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
ECHDC1Q9NTX5 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
ECHDC1Q9NTX5 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ECHDC1Q9NTX5 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC23.86■■□□□ 1.41
ECHDC1Q9NTX5 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
ECHDC1Q9NTX5 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ECHDC1Q9NTX5 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ECHDC1Q9NTX5 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
ECHDC1Q9NTX5 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
ECHDC1Q9NTX5 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
ECHDC1Q9NTX5 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
ECHDC1Q9NTX5 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
ECHDC1Q9NTX5 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ECHDC1Q9NTX5 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
ECHDC1Q9NTX5 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC23.86■■□□□ 1.41
ECHDC1Q9NTX5 NME1-207ENST00000480143 964 ntTSL 2 BASIC23.86■■□□□ 1.41
ECHDC1Q9NTX5 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
ECHDC1Q9NTX5 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
ECHDC1Q9NTX5 AC142381.4-202ENST00000563973 229 ntBASIC23.86■■□□□ 1.41
ECHDC1Q9NTX5 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.86■■□□□ 1.41
ECHDC1Q9NTX5 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
ECHDC1Q9NTX5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
ECHDC1Q9NTX5 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ECHDC1Q9NTX5 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ECHDC1Q9NTX5 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
ECHDC1Q9NTX5 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC23.86■■□□□ 1.41
ECHDC1Q9NTX5 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ECHDC1Q9NTX5 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
ECHDC1Q9NTX5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC23.85■■□□□ 1.41
ECHDC1Q9NTX5 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC23.85■■□□□ 1.41
ECHDC1Q9NTX5 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
ECHDC1Q9NTX5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ECHDC1Q9NTX5 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
ECHDC1Q9NTX5 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ECHDC1Q9NTX5 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ECHDC1Q9NTX5 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
ECHDC1Q9NTX5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms