Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CISHQ9NSE2 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.92■□□□□ 0.94
CISHQ9NSE2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CISHQ9NSE2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.92■□□□□ 0.94
CISHQ9NSE2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.92■□□□□ 0.94
CISHQ9NSE2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CISHQ9NSE2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CISHQ9NSE2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CISHQ9NSE2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CISHQ9NSE2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CISHQ9NSE2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CISHQ9NSE2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CISHQ9NSE2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CISHQ9NSE2 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.91■□□□□ 0.94
CISHQ9NSE2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CISHQ9NSE2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.91■□□□□ 0.94
CISHQ9NSE2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CISHQ9NSE2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CISHQ9NSE2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CISHQ9NSE2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CISHQ9NSE2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.91■□□□□ 0.94
CISHQ9NSE2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CISHQ9NSE2 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.91■□□□□ 0.94
CISHQ9NSE2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CISHQ9NSE2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.91■□□□□ 0.94
CISHQ9NSE2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.91■□□□□ 0.94
CISHQ9NSE2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.91■□□□□ 0.94
CISHQ9NSE2 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CISHQ9NSE2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CISHQ9NSE2 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
CISHQ9NSE2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CISHQ9NSE2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CISHQ9NSE2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CISHQ9NSE2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.9■□□□□ 0.94
CISHQ9NSE2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CISHQ9NSE2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.9■□□□□ 0.94
CISHQ9NSE2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CISHQ9NSE2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CISHQ9NSE2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.9■□□□□ 0.94
CISHQ9NSE2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
CISHQ9NSE2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CISHQ9NSE2 AC098590.1-201ENST00000468126 897 ntBASIC20.9■□□□□ 0.94
CISHQ9NSE2 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CISHQ9NSE2 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CISHQ9NSE2 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.9■□□□□ 0.94
CISHQ9NSE2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CISHQ9NSE2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CISHQ9NSE2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.9■□□□□ 0.94
CISHQ9NSE2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.9■□□□□ 0.94
CISHQ9NSE2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CISHQ9NSE2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CISHQ9NSE2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CISHQ9NSE2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
CISHQ9NSE2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.89■□□□□ 0.94
CISHQ9NSE2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CISHQ9NSE2 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CISHQ9NSE2 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CISHQ9NSE2 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CISHQ9NSE2 TUBB8P6-201ENST00000436895 1288 ntBASIC20.89■□□□□ 0.93
CISHQ9NSE2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CISHQ9NSE2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.89■□□□□ 0.93
CISHQ9NSE2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.89■□□□□ 0.93
CISHQ9NSE2 AC004264.1-201ENST00000608354 794 ntBASIC20.89■□□□□ 0.93
CISHQ9NSE2 AC110285.5-201ENST00000611501 352 ntBASIC20.89■□□□□ 0.93
CISHQ9NSE2 AL359736.2-201ENST00000621992 437 ntBASIC20.89■□□□□ 0.93
CISHQ9NSE2 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.89■□□□□ 0.93
CISHQ9NSE2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.89■□□□□ 0.93
CISHQ9NSE2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CISHQ9NSE2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.89■□□□□ 0.93
CISHQ9NSE2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CISHQ9NSE2 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CISHQ9NSE2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CISHQ9NSE2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.89■□□□□ 0.93
CISHQ9NSE2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CISHQ9NSE2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.89■□□□□ 0.93
CISHQ9NSE2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CISHQ9NSE2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CISHQ9NSE2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CISHQ9NSE2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CISHQ9NSE2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CISHQ9NSE2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CISHQ9NSE2 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.88■□□□□ 0.93
CISHQ9NSE2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CISHQ9NSE2 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CISHQ9NSE2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.88■□□□□ 0.93
CISHQ9NSE2 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.88■□□□□ 0.93
CISHQ9NSE2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CISHQ9NSE2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CISHQ9NSE2 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CISHQ9NSE2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
CISHQ9NSE2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CISHQ9NSE2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.88■□□□□ 0.93
CISHQ9NSE2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CISHQ9NSE2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
CISHQ9NSE2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CISHQ9NSE2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CISHQ9NSE2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CISHQ9NSE2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.88■□□□□ 0.93
CISHQ9NSE2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CISHQ9NSE2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms