Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC026271.3-201ENST00000571884 352 ntBASIC20.26■□□□□ 0.83
HPS4Q9NQG7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.26■□□□□ 0.83
HPS4Q9NQG7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
HPS4Q9NQG7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HPS4Q9NQG7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
HPS4Q9NQG7 KRT18P22-201ENST00000402024 1347 ntBASIC20.26■□□□□ 0.83
HPS4Q9NQG7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.26■□□□□ 0.83
HPS4Q9NQG7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HPS4Q9NQG7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HPS4Q9NQG7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.25■□□□□ 0.83
HPS4Q9NQG7 FSCN1P1-201ENST00000568912 1481 ntBASIC20.25■□□□□ 0.83
HPS4Q9NQG7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
HPS4Q9NQG7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HPS4Q9NQG7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.25■□□□□ 0.83
HPS4Q9NQG7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HPS4Q9NQG7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HPS4Q9NQG7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.25■□□□□ 0.83
HPS4Q9NQG7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HPS4Q9NQG7 TERF1P1-201ENST00000311003 1181 ntBASIC20.25■□□□□ 0.83
HPS4Q9NQG7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HPS4Q9NQG7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.25■□□□□ 0.83
HPS4Q9NQG7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.25■□□□□ 0.83
HPS4Q9NQG7 B3GAT3P1-201ENST00000471720 806 ntBASIC20.25■□□□□ 0.83
HPS4Q9NQG7 AC011506.1-201ENST00000474329 610 ntBASIC20.25■□□□□ 0.83
HPS4Q9NQG7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HPS4Q9NQG7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HPS4Q9NQG7 AL049597.2-201ENST00000565575 961 ntBASIC20.25■□□□□ 0.83
HPS4Q9NQG7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HPS4Q9NQG7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HPS4Q9NQG7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HPS4Q9NQG7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HPS4Q9NQG7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.25■□□□□ 0.83
HPS4Q9NQG7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.25■□□□□ 0.83
HPS4Q9NQG7 AC073508.3-201ENST00000619697 1419 ntBASIC20.25■□□□□ 0.83
HPS4Q9NQG7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HPS4Q9NQG7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HPS4Q9NQG7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HPS4Q9NQG7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
HPS4Q9NQG7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HPS4Q9NQG7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HPS4Q9NQG7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
HPS4Q9NQG7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.24■□□□□ 0.83
HPS4Q9NQG7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.24■□□□□ 0.83
HPS4Q9NQG7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HPS4Q9NQG7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HPS4Q9NQG7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HPS4Q9NQG7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HPS4Q9NQG7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
HPS4Q9NQG7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.24■□□□□ 0.83
HPS4Q9NQG7 AC004980.1-204ENST00000429707 299 ntBASIC20.24■□□□□ 0.83
HPS4Q9NQG7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.24■□□□□ 0.83
HPS4Q9NQG7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.24■□□□□ 0.83
HPS4Q9NQG7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.24■□□□□ 0.83
HPS4Q9NQG7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
HPS4Q9NQG7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HPS4Q9NQG7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HPS4Q9NQG7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.24■□□□□ 0.83
HPS4Q9NQG7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HPS4Q9NQG7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
HPS4Q9NQG7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HPS4Q9NQG7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HPS4Q9NQG7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HPS4Q9NQG7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HPS4Q9NQG7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HPS4Q9NQG7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HPS4Q9NQG7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
HPS4Q9NQG7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
HPS4Q9NQG7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HPS4Q9NQG7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HPS4Q9NQG7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
HPS4Q9NQG7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.23■□□□□ 0.83
HPS4Q9NQG7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.23■□□□□ 0.83
HPS4Q9NQG7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HPS4Q9NQG7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.23■□□□□ 0.83
HPS4Q9NQG7 TUBB8P6-201ENST00000436895 1288 ntBASIC20.23■□□□□ 0.83
HPS4Q9NQG7 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.23■□□□□ 0.83
HPS4Q9NQG7 SLC25A3P1-201ENST00000443844 931 ntBASIC20.23■□□□□ 0.83
HPS4Q9NQG7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.23■□□□□ 0.83
HPS4Q9NQG7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HPS4Q9NQG7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.23■□□□□ 0.83
HPS4Q9NQG7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.23■□□□□ 0.83
HPS4Q9NQG7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HPS4Q9NQG7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
HPS4Q9NQG7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HPS4Q9NQG7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.23■□□□□ 0.83
HPS4Q9NQG7 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.22■□□□□ 0.83
HPS4Q9NQG7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HPS4Q9NQG7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
HPS4Q9NQG7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.22■□□□□ 0.83
HPS4Q9NQG7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HPS4Q9NQG7 AC092667.1-201ENST00000434301 2586 ntBASIC20.22■□□□□ 0.83
HPS4Q9NQG7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HPS4Q9NQG7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.22■□□□□ 0.83
HPS4Q9NQG7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HPS4Q9NQG7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.22■□□□□ 0.83
HPS4Q9NQG7 AL137013.1-201ENST00000432946 1228 ntBASIC20.22■□□□□ 0.83
HPS4Q9NQG7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.22■□□□□ 0.83
HPS4Q9NQG7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.22■□□□□ 0.83
HPS4Q9NQG7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
HPS4Q9NQG7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms