Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1BQ9H9Y6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1BQ9H9Y6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1BQ9H9Y6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.35■□□□□ 0.69
POLR1BQ9H9Y6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1BQ9H9Y6 CD177P1-201ENST00000606252 935 ntBASIC19.35■□□□□ 0.69
POLR1BQ9H9Y6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1BQ9H9Y6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1BQ9H9Y6 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1BQ9H9Y6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
POLR1BQ9H9Y6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1BQ9H9Y6 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1BQ9H9Y6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1BQ9H9Y6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
POLR1BQ9H9Y6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
POLR1BQ9H9Y6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
POLR1BQ9H9Y6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
POLR1BQ9H9Y6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.69
POLR1BQ9H9Y6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
POLR1BQ9H9Y6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.33■□□□□ 0.69
POLR1BQ9H9Y6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
POLR1BQ9H9Y6 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
POLR1BQ9H9Y6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.33■□□□□ 0.69
POLR1BQ9H9Y6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
POLR1BQ9H9Y6 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
POLR1BQ9H9Y6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
POLR1BQ9H9Y6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.33■□□□□ 0.68
POLR1BQ9H9Y6 TMPOP1-202ENST00000424642 1267 ntBASIC19.33■□□□□ 0.68
POLR1BQ9H9Y6 AL355355.2-201ENST00000442321 338 ntBASIC19.33■□□□□ 0.68
POLR1BQ9H9Y6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.33■□□□□ 0.68
POLR1BQ9H9Y6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.33■□□□□ 0.68
POLR1BQ9H9Y6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
POLR1BQ9H9Y6 AP003071.4-201ENST00000562276 1284 ntBASIC19.33■□□□□ 0.68
POLR1BQ9H9Y6 AL353708.3-201ENST00000610272 989 ntBASIC19.33■□□□□ 0.68
POLR1BQ9H9Y6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.33■□□□□ 0.68
POLR1BQ9H9Y6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
POLR1BQ9H9Y6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
POLR1BQ9H9Y6 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
POLR1BQ9H9Y6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
POLR1BQ9H9Y6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
POLR1BQ9H9Y6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
POLR1BQ9H9Y6 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.33■□□□□ 0.68
POLR1BQ9H9Y6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
POLR1BQ9H9Y6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR1BQ9H9Y6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.32■□□□□ 0.68
POLR1BQ9H9Y6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.32■□□□□ 0.68
POLR1BQ9H9Y6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
POLR1BQ9H9Y6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR1BQ9H9Y6 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.32■□□□□ 0.68
POLR1BQ9H9Y6 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR1BQ9H9Y6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
POLR1BQ9H9Y6 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR1BQ9H9Y6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
POLR1BQ9H9Y6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
POLR1BQ9H9Y6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR1BQ9H9Y6 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.32■□□□□ 0.68
POLR1BQ9H9Y6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.32■□□□□ 0.68
POLR1BQ9H9Y6 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.32■□□□□ 0.68
POLR1BQ9H9Y6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.32■□□□□ 0.68
POLR1BQ9H9Y6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.32■□□□□ 0.68
POLR1BQ9H9Y6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR1BQ9H9Y6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR1BQ9H9Y6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR1BQ9H9Y6 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR1BQ9H9Y6 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR1BQ9H9Y6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms