Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CHMP4BQ9H444 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CHMP4BQ9H444 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC24.72■■□□□ 1.55
CHMP4BQ9H444 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CHMP4BQ9H444 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
CHMP4BQ9H444 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC24.71■■□□□ 1.55
CHMP4BQ9H444 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CHMP4BQ9H444 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC24.71■■□□□ 1.55
CHMP4BQ9H444 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CHMP4BQ9H444 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CHMP4BQ9H444 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
CHMP4BQ9H444 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
CHMP4BQ9H444 AC124283.5-201ENST00000624661 1809 ntBASIC24.71■■□□□ 1.55
CHMP4BQ9H444 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
CHMP4BQ9H444 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC24.71■■□□□ 1.55
CHMP4BQ9H444 NME1-207ENST00000480143 964 ntTSL 2 BASIC24.71■■□□□ 1.55
CHMP4BQ9H444 UNC93B5-201ENST00000530315 699 ntBASIC24.71■■□□□ 1.55
CHMP4BQ9H444 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
CHMP4BQ9H444 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
CHMP4BQ9H444 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CHMP4BQ9H444 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC24.71■■□□□ 1.55
CHMP4BQ9H444 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CHMP4BQ9H444 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC24.71■■□□□ 1.55
CHMP4BQ9H444 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
CHMP4BQ9H444 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
CHMP4BQ9H444 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
CHMP4BQ9H444 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.55
CHMP4BQ9H444 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC24.7■■□□□ 1.55
CHMP4BQ9H444 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
CHMP4BQ9H444 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CHMP4BQ9H444 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CHMP4BQ9H444 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CHMP4BQ9H444 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC24.7■■□□□ 1.54
CHMP4BQ9H444 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC24.7■■□□□ 1.54
CHMP4BQ9H444 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC24.7■■□□□ 1.54
CHMP4BQ9H444 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CHMP4BQ9H444 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
CHMP4BQ9H444 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CHMP4BQ9H444 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
CHMP4BQ9H444 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CHMP4BQ9H444 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
CHMP4BQ9H444 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CHMP4BQ9H444 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CHMP4BQ9H444 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CHMP4BQ9H444 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CHMP4BQ9H444 GOLGA6L3-201ENST00000507199 1679 ntBASIC24.69■■□□□ 1.54
CHMP4BQ9H444 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CHMP4BQ9H444 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC24.69■■□□□ 1.54
CHMP4BQ9H444 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC24.69■■□□□ 1.54
CHMP4BQ9H444 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CHMP4BQ9H444 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC24.69■■□□□ 1.54
CHMP4BQ9H444 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC24.69■■□□□ 1.54
CHMP4BQ9H444 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CHMP4BQ9H444 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CHMP4BQ9H444 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC24.69■■□□□ 1.54
CHMP4BQ9H444 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC24.69■■□□□ 1.54
CHMP4BQ9H444 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC24.69■■□□□ 1.54
CHMP4BQ9H444 PNN-205ENST00000556530 601 ntTSL 2 BASIC24.69■■□□□ 1.54
CHMP4BQ9H444 EMC9-206ENST00000560403 872 ntTSL 2 BASIC24.69■■□□□ 1.54
CHMP4BQ9H444 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
CHMP4BQ9H444 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
CHMP4BQ9H444 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CHMP4BQ9H444 AC093484.2-201ENST00000580996 2166 ntBASIC24.69■■□□□ 1.54
CHMP4BQ9H444 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHMP4BQ9H444 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
CHMP4BQ9H444 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC24.68■■□□□ 1.54
CHMP4BQ9H444 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CHMP4BQ9H444 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHMP4BQ9H444 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHMP4BQ9H444 POM121L13P-201ENST00000422362 380 ntBASIC24.68■■□□□ 1.54
CHMP4BQ9H444 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC24.68■■□□□ 1.54
CHMP4BQ9H444 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC24.68■■□□□ 1.54
CHMP4BQ9H444 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC24.68■■□□□ 1.54
CHMP4BQ9H444 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHMP4BQ9H444 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHMP4BQ9H444 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHMP4BQ9H444 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHMP4BQ9H444 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHMP4BQ9H444 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CHMP4BQ9H444 AC116562.4-201ENST00000641316 2276 ntBASIC24.68■■□□□ 1.54
CHMP4BQ9H444 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC24.68■■□□□ 1.54
CHMP4BQ9H444 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CHMP4BQ9H444 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
CHMP4BQ9H444 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CHMP4BQ9H444 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
CHMP4BQ9H444 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
CHMP4BQ9H444 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CHMP4BQ9H444 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
CHMP4BQ9H444 AC005332.7-201ENST00000614046 2005 ntBASIC24.67■■□□□ 1.54
CHMP4BQ9H444 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC24.67■■□□□ 1.54
CHMP4BQ9H444 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC24.67■■□□□ 1.54
CHMP4BQ9H444 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CHMP4BQ9H444 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC24.66■■□□□ 1.54
CHMP4BQ9H444 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
CHMP4BQ9H444 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC24.66■■□□□ 1.54
CHMP4BQ9H444 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CHMP4BQ9H444 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CHMP4BQ9H444 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC24.66■■□□□ 1.54
CHMP4BQ9H444 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CHMP4BQ9H444 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms