Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCX3BQ9H321 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCX3BQ9H321 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.64■□□□□ 0.57
VCX3BQ9H321 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VCX3BQ9H321 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.64■□□□□ 0.57
VCX3BQ9H321 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCX3BQ9H321 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCX3BQ9H321 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCX3BQ9H321 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCX3BQ9H321 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.64■□□□□ 0.57
VCX3BQ9H321 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCX3BQ9H321 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VCX3BQ9H321 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.64■□□□□ 0.57
VCX3BQ9H321 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCX3BQ9H321 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.64■□□□□ 0.57
VCX3BQ9H321 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCX3BQ9H321 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
VCX3BQ9H321 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.64■□□□□ 0.57
VCX3BQ9H321 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCX3BQ9H321 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
VCX3BQ9H321 MKRN4P-201ENST00000444706 1521 ntBASIC18.64■□□□□ 0.57
VCX3BQ9H321 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.64■□□□□ 0.57
VCX3BQ9H321 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
VCX3BQ9H321 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
VCX3BQ9H321 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3BQ9H321 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3BQ9H321 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3BQ9H321 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3BQ9H321 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3BQ9H321 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3BQ9H321 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3BQ9H321 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
VCX3BQ9H321 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
VCX3BQ9H321 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
VCX3BQ9H321 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3BQ9H321 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3BQ9H321 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.63■□□□□ 0.57
VCX3BQ9H321 KRT125P-201ENST00000546827 989 ntBASIC18.63■□□□□ 0.57
VCX3BQ9H321 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.63■□□□□ 0.57
VCX3BQ9H321 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.63■□□□□ 0.57
VCX3BQ9H321 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3BQ9H321 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3BQ9H321 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3BQ9H321 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.63■□□□□ 0.57
VCX3BQ9H321 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
VCX3BQ9H321 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.63■□□□□ 0.57
VCX3BQ9H321 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3BQ9H321 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3BQ9H321 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3BQ9H321 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3BQ9H321 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3BQ9H321 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
VCX3BQ9H321 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3BQ9H321 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
VCX3BQ9H321 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3BQ9H321 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VCX3BQ9H321 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.63■□□□□ 0.57
VCX3BQ9H321 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VCX3BQ9H321 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VCX3BQ9H321 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VCX3BQ9H321 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
VCX3BQ9H321 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VCX3BQ9H321 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
VCX3BQ9H321 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
VCX3BQ9H321 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.62■□□□□ 0.57
VCX3BQ9H321 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VCX3BQ9H321 AC092171.4-201ENST00000609130 632 ntBASIC18.62■□□□□ 0.57
VCX3BQ9H321 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VCX3BQ9H321 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
VCX3BQ9H321 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VCX3BQ9H321 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
VCX3BQ9H321 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.62■□□□□ 0.57
VCX3BQ9H321 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VCX3BQ9H321 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VCX3BQ9H321 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VCX3BQ9H321 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
VCX3BQ9H321 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VCX3BQ9H321 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
VCX3BQ9H321 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
VCX3BQ9H321 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
VCX3BQ9H321 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.61■□□□□ 0.57
VCX3BQ9H321 AC068880.1-201ENST00000507289 2297 ntBASIC18.61■□□□□ 0.57
VCX3BQ9H321 WIZP1-201ENST00000531444 2299 ntBASIC18.61■□□□□ 0.57
VCX3BQ9H321 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
VCX3BQ9H321 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.61■□□□□ 0.57
VCX3BQ9H321 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.61■□□□□ 0.57
VCX3BQ9H321 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.61■□□□□ 0.57
VCX3BQ9H321 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VCX3BQ9H321 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
VCX3BQ9H321 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.61■□□□□ 0.57
VCX3BQ9H321 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VCX3BQ9H321 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VCX3BQ9H321 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.61■□□□□ 0.57
VCX3BQ9H321 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VCX3BQ9H321 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
VCX3BQ9H321 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
VCX3BQ9H321 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.61■□□□□ 0.57
VCX3BQ9H321 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VCX3BQ9H321 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.61■□□□□ 0.57
VCX3BQ9H321 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms