Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDT1Q9H211 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDT1Q9H211 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDT1Q9H211 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDT1Q9H211 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CDT1Q9H211 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.26■□□□□ 0.99
CDT1Q9H211 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDT1Q9H211 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDT1Q9H211 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.26■□□□□ 0.99
CDT1Q9H211 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.26■□□□□ 0.99
CDT1Q9H211 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDT1Q9H211 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.26■□□□□ 0.99
CDT1Q9H211 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.25■□□□□ 0.99
CDT1Q9H211 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDT1Q9H211 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDT1Q9H211 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.25■□□□□ 0.99
CDT1Q9H211 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDT1Q9H211 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CDT1Q9H211 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDT1Q9H211 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CDT1Q9H211 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.25■□□□□ 0.99
CDT1Q9H211 AL355355.2-201ENST00000442321 338 ntBASIC21.25■□□□□ 0.99
CDT1Q9H211 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.25■□□□□ 0.99
CDT1Q9H211 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDT1Q9H211 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDT1Q9H211 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDT1Q9H211 NUDT16P1-203ENST00000513809 620 ntBASIC21.25■□□□□ 0.99
CDT1Q9H211 AL355075.4-201ENST00000554988 638 ntBASIC21.25■□□□□ 0.99
CDT1Q9H211 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDT1Q9H211 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.25■□□□□ 0.99
CDT1Q9H211 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.25■□□□□ 0.99
CDT1Q9H211 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.25■□□□□ 0.99
CDT1Q9H211 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDT1Q9H211 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CDT1Q9H211 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDT1Q9H211 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDT1Q9H211 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.25■□□□□ 0.99
CDT1Q9H211 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDT1Q9H211 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CDT1Q9H211 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDT1Q9H211 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDT1Q9H211 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDT1Q9H211 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDT1Q9H211 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CDT1Q9H211 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDT1Q9H211 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
CDT1Q9H211 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
CDT1Q9H211 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDT1Q9H211 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDT1Q9H211 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDT1Q9H211 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDT1Q9H211 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.24■□□□□ 0.99
CDT1Q9H211 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDT1Q9H211 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.24■□□□□ 0.99
CDT1Q9H211 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.24■□□□□ 0.99
CDT1Q9H211 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.24■□□□□ 0.99
CDT1Q9H211 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDT1Q9H211 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.24■□□□□ 0.99
CDT1Q9H211 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.24■□□□□ 0.99
CDT1Q9H211 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.24■□□□□ 0.99
CDT1Q9H211 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDT1Q9H211 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDT1Q9H211 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDT1Q9H211 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CDT1Q9H211 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDT1Q9H211 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CDT1Q9H211 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDT1Q9H211 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CDT1Q9H211 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDT1Q9H211 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDT1Q9H211 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDT1Q9H211 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDT1Q9H211 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.23■□□□□ 0.99
CDT1Q9H211 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.23■□□□□ 0.99
CDT1Q9H211 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.23■□□□□ 0.99
CDT1Q9H211 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.23■□□□□ 0.99
CDT1Q9H211 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.23■□□□□ 0.99
CDT1Q9H211 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.23■□□□□ 0.99
CDT1Q9H211 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.23■□□□□ 0.99
CDT1Q9H211 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDT1Q9H211 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.23■□□□□ 0.99
CDT1Q9H211 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
CDT1Q9H211 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDT1Q9H211 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.23■□□□□ 0.99
CDT1Q9H211 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CDT1Q9H211 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDT1Q9H211 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDT1Q9H211 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CDT1Q9H211 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.22■□□□□ 0.99
CDT1Q9H211 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CDT1Q9H211 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.22■□□□□ 0.99
CDT1Q9H211 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDT1Q9H211 AC004980.1-204ENST00000429707 299 ntBASIC21.22■□□□□ 0.99
CDT1Q9H211 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDT1Q9H211 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
CDT1Q9H211 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.22■□□□□ 0.99
CDT1Q9H211 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.22■□□□□ 0.99
CDT1Q9H211 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.22■□□□□ 0.99
CDT1Q9H211 REXO1L10P-201ENST00000615707 1290 ntBASIC21.22■□□□□ 0.99
CDT1Q9H211 REXO1L12P-201ENST00000622156 912 ntBASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms