Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
UPK3BQ9BT76 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
UPK3BQ9BT76 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
UPK3BQ9BT76 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC13.61□□□□□ -0.23
UPK3BQ9BT76 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
UPK3BQ9BT76 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
UPK3BQ9BT76 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UPK3BQ9BT76 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UPK3BQ9BT76 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
UPK3BQ9BT76 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC13.61□□□□□ -0.23
UPK3BQ9BT76 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UPK3BQ9BT76 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC13.61□□□□□ -0.23
UPK3BQ9BT76 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UPK3BQ9BT76 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC13.61□□□□□ -0.23
UPK3BQ9BT76 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
UPK3BQ9BT76 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UPK3BQ9BT76 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UPK3BQ9BT76 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC13.61□□□□□ -0.23
UPK3BQ9BT76 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UPK3BQ9BT76 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UPK3BQ9BT76 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC13.61□□□□□ -0.23
UPK3BQ9BT76 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC13.61□□□□□ -0.23
UPK3BQ9BT76 RARRES2P10-201ENST00000564312 460 ntBASIC13.61□□□□□ -0.23
UPK3BQ9BT76 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC13.61□□□□□ -0.23
UPK3BQ9BT76 AP001412.1-201ENST00000608405 714 ntBASIC13.61□□□□□ -0.23
UPK3BQ9BT76 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UPK3BQ9BT76 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC13.61□□□□□ -0.23
UPK3BQ9BT76 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC13.61□□□□□ -0.23
UPK3BQ9BT76 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UPK3BQ9BT76 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
UPK3BQ9BT76 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
UPK3BQ9BT76 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
UPK3BQ9BT76 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UPK3BQ9BT76 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC13.61□□□□□ -0.23
UPK3BQ9BT76 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UPK3BQ9BT76 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UPK3BQ9BT76 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK3BQ9BT76 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK3BQ9BT76 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK3BQ9BT76 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC13.6□□□□□ -0.23
UPK3BQ9BT76 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC13.6□□□□□ -0.23
UPK3BQ9BT76 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK3BQ9BT76 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
UPK3BQ9BT76 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK3BQ9BT76 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK3BQ9BT76 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
UPK3BQ9BT76 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC13.6□□□□□ -0.23
UPK3BQ9BT76 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK3BQ9BT76 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
UPK3BQ9BT76 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC13.6□□□□□ -0.23
UPK3BQ9BT76 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC13.6□□□□□ -0.23
UPK3BQ9BT76 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC13.6□□□□□ -0.23
UPK3BQ9BT76 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK3BQ9BT76 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK3BQ9BT76 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC13.6□□□□□ -0.23
UPK3BQ9BT76 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK3BQ9BT76 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UPK3BQ9BT76 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.6□□□□□ -0.23
UPK3BQ9BT76 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC13.6□□□□□ -0.23
UPK3BQ9BT76 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK3BQ9BT76 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UPK3BQ9BT76 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UPK3BQ9BT76 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK3BQ9BT76 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UPK3BQ9BT76 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK3BQ9BT76 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK3BQ9BT76 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UPK3BQ9BT76 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC13.59□□□□□ -0.23
UPK3BQ9BT76 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK3BQ9BT76 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK3BQ9BT76 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK3BQ9BT76 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK3BQ9BT76 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UPK3BQ9BT76 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UPK3BQ9BT76 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
UPK3BQ9BT76 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC13.59□□□□□ -0.23
UPK3BQ9BT76 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.59□□□□□ -0.23
UPK3BQ9BT76 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC13.59□□□□□ -0.23
UPK3BQ9BT76 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UPK3BQ9BT76 KRT16P5-201ENST00000455284 522 ntBASIC13.59□□□□□ -0.23
UPK3BQ9BT76 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC13.59□□□□□ -0.23
UPK3BQ9BT76 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC13.59□□□□□ -0.23
UPK3BQ9BT76 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UPK3BQ9BT76 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC13.59□□□□□ -0.23
UPK3BQ9BT76 AC004264.1-201ENST00000608354 794 ntBASIC13.59□□□□□ -0.23
UPK3BQ9BT76 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK3BQ9BT76 NBPF21P-201ENST00000425093 1451 ntBASIC13.59□□□□□ -0.23
UPK3BQ9BT76 AC124283.5-201ENST00000624661 1809 ntBASIC13.59□□□□□ -0.23
UPK3BQ9BT76 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms