Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 PRSS44-201ENST00000515154 1146 ntBASIC16.52■□□□□ 0.24
FOXC2Q99958 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.52■□□□□ 0.24
FOXC2Q99958 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
FOXC2Q99958 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.52■□□□□ 0.24
FOXC2Q99958 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
FOXC2Q99958 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FOXC2Q99958 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FOXC2Q99958 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.52■□□□□ 0.23
FOXC2Q99958 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXC2Q99958 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXC2Q99958 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXC2Q99958 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXC2Q99958 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXC2Q99958 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXC2Q99958 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXC2Q99958 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.51■□□□□ 0.23
FOXC2Q99958 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.51■□□□□ 0.23
FOXC2Q99958 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
FOXC2Q99958 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXC2Q99958 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
FOXC2Q99958 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.51■□□□□ 0.23
FOXC2Q99958 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.51■□□□□ 0.23
FOXC2Q99958 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXC2Q99958 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXC2Q99958 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.51■□□□□ 0.23
FOXC2Q99958 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.51■□□□□ 0.23
FOXC2Q99958 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.51■□□□□ 0.23
FOXC2Q99958 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.51■□□□□ 0.23
FOXC2Q99958 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
FOXC2Q99958 AL023803.3-201ENST00000615559 522 ntBASIC16.51■□□□□ 0.23
FOXC2Q99958 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.51■□□□□ 0.23
FOXC2Q99958 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXC2Q99958 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXC2Q99958 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXC2Q99958 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXC2Q99958 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC16.51■□□□□ 0.23
FOXC2Q99958 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXC2Q99958 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXC2Q99958 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXC2Q99958 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
FOXC2Q99958 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FOXC2Q99958 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.5■□□□□ 0.23
FOXC2Q99958 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXC2Q99958 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXC2Q99958 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
FOXC2Q99958 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXC2Q99958 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXC2Q99958 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FOXC2Q99958 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXC2Q99958 ATP5G2P1-201ENST00000433580 426 ntBASIC16.5■□□□□ 0.23
FOXC2Q99958 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.5■□□□□ 0.23
FOXC2Q99958 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.5■□□□□ 0.23
FOXC2Q99958 AC008040.2-201ENST00000461049 708 ntBASIC16.5■□□□□ 0.23
FOXC2Q99958 AL441883.1-201ENST00000566170 1045 ntBASIC16.5■□□□□ 0.23
FOXC2Q99958 AL353719.1-201ENST00000566847 864 ntBASIC16.5■□□□□ 0.23
FOXC2Q99958 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.5■□□□□ 0.23
FOXC2Q99958 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
FOXC2Q99958 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.5■□□□□ 0.23
FOXC2Q99958 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXC2Q99958 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
FOXC2Q99958 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXC2Q99958 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
FOXC2Q99958 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXC2Q99958 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXC2Q99958 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXC2Q99958 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXC2Q99958 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXC2Q99958 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXC2Q99958 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXC2Q99958 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FOXC2Q99958 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXC2Q99958 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXC2Q99958 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
FOXC2Q99958 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FOXC2Q99958 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FOXC2Q99958 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXC2Q99958 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
FOXC2Q99958 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXC2Q99958 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FOXC2Q99958 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXC2Q99958 KRT8P17-201ENST00000453110 1448 ntBASIC16.49■□□□□ 0.23
FOXC2Q99958 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.49■□□□□ 0.23
FOXC2Q99958 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FOXC2Q99958 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.49■□□□□ 0.23
FOXC2Q99958 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXC2Q99958 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXC2Q99958 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FOXC2Q99958 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
FOXC2Q99958 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXC2Q99958 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FOXC2Q99958 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXC2Q99958 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXC2Q99958 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FOXC2Q99958 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FOXC2Q99958 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.48■□□□□ 0.23
FOXC2Q99958 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXC2Q99958 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXC2Q99958 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXC2Q99958 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FOXC2Q99958 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms